RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 CELA2AP08217 269 aa8.46□□□□□ -1.06
USP54-205ENST00000424265 SCAND1P57086 179 aa8.46□□□□□ -1.06
USP54-205ENST00000424265 TSPAN32Q96QS1 320 aa8.46□□□□□ -1.06
USP54-205ENST00000424265 GPX7Q96SL4 187 aaPredicted RBP8.46□□□□□ -1.06
USP54-205ENST00000424265 ELOVL5Q9NYP7 299 aa8.46□□□□□ -1.06
USP54-205ENST00000424265 ZNF391Q9UJN7 358 aa8.46□□□□□ -1.06
USP54-205ENST00000424265 ANKRD30BLA7E2S9 258 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 AMY2BP19961 511 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 SRP14P37108 136 aaKnown RBP8.45□□□□□ -1.06
USP54-205ENST00000424265 COA6Q5JTJ3 125 aaKnown RBP8.45□□□□□ -1.06
USP54-205ENST00000424265 COA3Q9Y2R0 106 aaPredicted RBP8.45□□□□□ -1.06
USP54-205ENST00000424265 TRGV8A0A0C4DH27 118 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 ST8SIA3O43173 380 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 GCM2O75603 506 aaPredicted RBP8.45□□□□□ -1.06
USP54-205ENST00000424265 TAS2R30P59541 319 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 ARFRP1Q13795 201 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 PMCHL1Q16048 86 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 ZNF787Q6DD87 383 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 FADS6Q8N9I5 356 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 OR4D11Q8NGI4 311 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 TMEM45BQ96B21 275 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 GNPNAT1Q96EK6 184 aaPredicted RBP8.45□□□□□ -1.06
USP54-205ENST00000424265 YPEL4Q96NS1 127 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 ANAPC13Q9BS18 74 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 B9D1Q9UPM9 204 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 OR2T8A6NH00 312 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 ZNF716A6NP11 495 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 HYPMO75409 117 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 ZNF735P0CB33 412 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 HRH1P35367 487 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 RND2P52198 227 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 LRRC10Q5BKY1 277 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 WDR82Q6UXN9 313 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 SPACA3Q8IXA5 215 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 CACNG8Q8WXS5 425 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 NINJ1Q92982 152 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 PGLYRP3Q96LB9 341 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 HEATR5BQ9P2D3 2071 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 TRBV6-7A0A0A0MS04 114 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 A0A1W2PPV4 95 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 SMIM20Q8N5G0 67 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 AKIRIN1Q9H9L7 192 aaPredicted RBP8.45□□□□□ -1.06
USP54-205ENST00000424265 UBTD1Q9HAC8 227 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 TUBD1Q9UJT1 453 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 KLK13Q9UKR3 277 aa8.45□□□□□ -1.06
USP54-205ENST00000424265 TRBV7-9A0A0J9YWB2 115 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 H3BMH7 237 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 CCL2P13500 99 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 ZNF506Q5JVG8 444 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 UNQ9370/PRO34162Q6UXP9 181 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 ZNF562Q6V9R5 426 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 OR5D14Q8NGL3 314 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 IMMP2LQ96T52 175 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 MPZL1O95297 269 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 CRYBA2P53672 197 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 OR2Z1Q8NG97 314 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 CACNA1HO95180 2353 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 NKX2-6A6NCS4 301 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 A6NDN8 102 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 F5H5K5 113 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 H7C1C5 153 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 ACTL10Q5JWF8 245 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 FDCSPQ8NFU4 85 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 C20orf141Q9NUB4 165 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 ATG2AQ2TAZ0 1938 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 PLAURQ03405 335 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 TDRG1Q3Y452 100 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 PLCXD3Q63HM9 321 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 DTX1Q86Y01 620 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 OR52E5Q8NH55 327 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 KISS1RQ969F8 398 aaPredicted RBP8.44□□□□□ -1.06
USP54-205ENST00000424265 FOXB1Q99853 325 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 PRSS27Q9BQR3 290 aa8.44□□□□□ -1.06
USP54-205ENST00000424265 A0A0G2JMM0 328 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 A0A1W2PPB8 328 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 KIR3DP1A8MWS1 328 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 H0YIZ8 118 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 ZNF253O75346 499 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 C1orf174Q8IYL3 243 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 JKAMPQ9P055 326 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 MDFIC2A0A1B0GVS7 189 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 GRIFINA4D1Z8 144 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 TMEM229AB2RXF0 380 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 XRCC2O43543 280 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 ASAH2BP0C7U1 165 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 PMP22Q01453 160 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 PAQR4Q8N4S7 273 aaPredicted RBP8.43□□□□□ -1.06
USP54-205ENST00000424265 SH3BGRL3Q9H299 93 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 MED29Q9NX70 200 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 PRR13Q9NZ81 148 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 CHD3Q12873 2000 aaKnown RBP8.43□□□□□ -1.06
USP54-205ENST00000424265 PPIAL4CA0A0B4J2A2 164 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 NUDT3O95989 172 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 PPIAL4GP0DN37 164 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 IGLC2P0DOY2 106 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 IGLC3P0DOY3 106 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 CD33P20138 364 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 NPBWR2P48146 333 aa8.43□□□□□ -1.06
USP54-205ENST00000424265 FNDC4Q9H6D8 234 aaPredicted RBP8.43□□□□□ -1.06
USP54-205ENST00000424265 ZNF703Q9H7S9 590 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms