RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 SLC5A7Q9GZV3 580 aa10.15□□□□□ -0.78
TMEM53-206ENST00000420706 GHITMQ9H3K2 345 aa10.15□□□□□ -0.78
TMEM53-206ENST00000420706 YAE1D1Q9NRH1 226 aa10.15□□□□□ -0.78
TMEM53-206ENST00000420706 CCL28Q9NRJ3 127 aa10.15□□□□□ -0.78
TMEM53-206ENST00000420706 GPR132Q9UNW8 380 aa10.15□□□□□ -0.78
TMEM53-206ENST00000420706 ABCA1O95477 2261 aa10.15□□□□□ -0.78
TMEM53-206ENST00000420706 MYO9AB2RTY4 2548 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 TRAV40A0A0B4J280 105 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 FAM240BA0A1B0GVZ2 78 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 BUB1B-PAK6H3BSN5 160 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 PROP1O75360 226 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 LY6G6DO95868 133 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 IGLV2-14P01704 120 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 IGHV4-38-2P0DP08 117 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 GNRHRP30968 328 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 ECI1P42126 302 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 PLA1AQ53H76 456 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 LDLRAD2Q5SZI1 272 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 LPCAT3Q6P1A2 487 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 LYG1Q8N1E2 194 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 OR10X1Q8NGY0 326 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 MARCH1Q8TCQ1 289 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 TOMM40LQ969M1 308 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 SLC25A21Q9BQT8 299 aaPredicted RBP10.14□□□□□ -0.79
TMEM53-206ENST00000420706 RSRP1Q9BUV0 290 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 OR2D2Q9H210 308 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 DPAGT1Q9H3H5 408 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 PIPOXQ9P0Z9 390 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 ZNF221Q9UK13 617 aa10.14□□□□□ -0.79
TMEM53-206ENST00000420706 ZNF469Q96JG9 3925 aaPredicted RBP10.13□□□□□ -0.79
TMEM53-206ENST00000420706 IGHV3OR16-10A0A075B7F0 116 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 IGHV1-69DA0A0B4J2H0 117 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 A8MV72 311 aaPredicted RBP10.13□□□□□ -0.79
TMEM53-206ENST00000420706 LY6LH3BQJ8 138 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 HSD17B6O14756 317 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 RAB29O14966 203 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 SLC22A5O76082 557 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 NDUFB6O95139 128 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 FSHBP01225 129 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 IGHV1-69P01742 117 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 TCRBP04435 133 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 PGAM2P15259 253 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 IL3RAP26951 378 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 HTR1DP28221 377 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 GPR12P47775 334 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 LGALS4P56470 323 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 RBMS2Q15434 407 aaKnown RBP10.13□□□□□ -0.79
TMEM53-206ENST00000420706 SURF2Q15527 256 aaPredicted RBP10.13□□□□□ -0.79
TMEM53-206ENST00000420706 MINOS1Q5TGZ0 78 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 GPR157Q5UAW9 335 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 RUSC1-AS1Q66K80 236 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 ZNF818PQ6ZRF7 136 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 NRARPQ7Z6K4 114 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 LHFPL4Q7Z7J7 247 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 SLC38A6Q8IZM9 456 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 PIP4P2Q8N4L2 257 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 ZNF645Q8N7E2 425 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 ZBTB34Q8NCN2 500 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 DUSP18Q8NEJ0 188 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 NANPQ8TBE9 248 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 ZFAND1Q8TCF1 268 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 ST6GALNAC6Q969X2 333 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 CREB3L1Q96BA8 519 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 C5orf30Q96GV9 206 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 AKR1E2Q96JD6 320 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 SCGB3A2Q96PL1 93 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 ZNF251Q9BRH9 671 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 OCEL1Q9H607 264 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 SDHAF2Q9NX18 166 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 DPM3Q9P2X0 92 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 VSIG4Q9Y279 399 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 TBL2Q9Y4P3 447 aaKnown RBP10.13□□□□□ -0.79
TMEM53-206ENST00000420706 MINOS1-NBL1R4GNA1 71 aa10.13□□□□□ -0.79
TMEM53-206ENST00000420706 ITPR3Q14573 2671 aa10.12□□□□□ -0.79
TMEM53-206ENST00000420706 SAA2-SAA4A0A096LPE2 208 aa10.12□□□□□ -0.79
TMEM53-206ENST00000420706 LEUTXA8MZ59 168 aa10.12□□□□□ -0.79
TMEM53-206ENST00000420706 GPR31O00270 319 aa10.12□□□□□ -0.79
TMEM53-206ENST00000420706 NPFFO15130 113 aa10.12□□□□□ -0.79
TMEM53-206ENST00000420706 CTSDP07339 412 aaPredicted RBP10.12□□□□□ -0.79
TMEM53-206ENST00000420706 SAA2P0DJI9 122 aaPredicted RBP10.12□□□□□ -0.79
TMEM53-206ENST00000420706 ZNF137PP52743 207 aa10.12□□□□□ -0.79
TMEM53-206ENST00000420706 BAMBIQ13145 260 aa10.12□□□□□ -0.79
TMEM53-206ENST00000420706 DIAPH2-AS1Q14236 149 aa10.12□□□□□ -0.79
TMEM53-206ENST00000420706 MSMO1Q15800 293 aa10.12□□□□□ -0.79
TMEM53-206ENST00000420706 MIDNQ504T8 468 aa10.12□□□□□ -0.79
TMEM53-206ENST00000420706 RPL39P5Q59GN2 51 aa10.12□□□□□ -0.79
TMEM53-206ENST00000420706 ZNF833PQ6ZTB9 187 aa10.12□□□□□ -0.79
TMEM53-206ENST00000420706 DRAM1Q8N682 238 aa10.12□□□□□ -0.79
TMEM53-206ENST00000420706 ZDHHC22Q8N966 263 aa10.12□□□□□ -0.79
TMEM53-206ENST00000420706 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.12□□□□□ -0.79
TMEM53-206ENST00000420706 ENKURQ8TC29 256 aa10.12□□□□□ -0.79
TMEM53-206ENST00000420706 ZNF486Q96H40 463 aaPredicted RBP10.12□□□□□ -0.79
TMEM53-206ENST00000420706 AJUBAQ96IF1 538 aa10.12□□□□□ -0.79
TMEM53-206ENST00000420706 RTBDNQ9BSG5 229 aaPredicted RBP10.12□□□□□ -0.79
TMEM53-206ENST00000420706 C5orf66Q9H5L9 145 aa10.12□□□□□ -0.79
TMEM53-206ENST00000420706 AMMECR1Q9Y4X0 333 aaPredicted RBP10.12□□□□□ -0.79
TMEM53-206ENST00000420706 SPNP16150 400 aa10.11□□□□□ -0.79
TMEM53-206ENST00000420706 PI3P19957 117 aa10.11□□□□□ -0.79
TMEM53-206ENST00000420706 BPIFB3P59826 476 aa10.11□□□□□ -0.79
TMEM53-206ENST00000420706 EIF4EBP1Q13541 118 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms