RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ZNF833PQ6ZTB9 187 aa19.85■□□□□ 0.77
VEGFA-208ENST00000417285 NABP2Q9BQ15 211 aa19.85■□□□□ 0.77
VEGFA-208ENST00000417285 ZNF251Q9BRH9 671 aa19.85■□□□□ 0.77
VEGFA-208ENST00000417285 PIPOXQ9P0Z9 390 aa19.85■□□□□ 0.77
VEGFA-208ENST00000417285 SAA2-SAA4A0A096LPE2 208 aa19.84■□□□□ 0.77
VEGFA-208ENST00000417285 SAA2P0DJI9 122 aaPredicted RBP19.84■□□□□ 0.77
VEGFA-208ENST00000417285 ACTBP60709 375 aa19.84■□□□□ 0.77
VEGFA-208ENST00000417285 FAM71F2Q6NXP2 309 aa19.84■□□□□ 0.77
VEGFA-208ENST00000417285 FAM3DQ96BQ1 224 aa19.84■□□□□ 0.77
VEGFA-208ENST00000417285 KCTD7Q96MP8 289 aa19.84■□□□□ 0.77
VEGFA-208ENST00000417285 GHITMQ9H3K2 345 aa19.84■□□□□ 0.77
VEGFA-208ENST00000417285 OR3A3P47888 321 aa19.83■□□□□ 0.77
VEGFA-208ENST00000417285 VEGFCP49767 419 aa19.83■□□□□ 0.77
VEGFA-208ENST00000417285 CLDN12P56749 244 aa19.83■□□□□ 0.77
VEGFA-208ENST00000417285 LCNL1Q6ZST4 164 aa19.83■□□□□ 0.77
VEGFA-208ENST00000417285 IFI27L2Q9H2X8 130 aa19.83■□□□□ 0.77
VEGFA-208ENST00000417285 C12orf4Q9NQ89 552 aa19.83■□□□□ 0.77
VEGFA-208ENST00000417285 FOXI3A8MTJ6 420 aaPredicted RBP19.82■□□□□ 0.76
VEGFA-208ENST00000417285 PDCD5O14737 125 aa19.82■□□□□ 0.76
VEGFA-208ENST00000417285 RAB29O14966 203 aa19.82■□□□□ 0.76
VEGFA-208ENST00000417285 ST8SIA5O15466 376 aa19.82■□□□□ 0.76
VEGFA-208ENST00000417285 HLA-DRB1P01911 266 aa19.82■□□□□ 0.76
VEGFA-208ENST00000417285 PSMB8P28062 276 aa19.82■□□□□ 0.76
VEGFA-208ENST00000417285 HLA-DRB3P79483 266 aa19.82■□□□□ 0.76
VEGFA-208ENST00000417285 DGCR2P98153 550 aa19.82■□□□□ 0.76
VEGFA-208ENST00000417285 SSX1Q16384 188 aa19.82■□□□□ 0.76
VEGFA-208ENST00000417285 C2orf76Q3KRA6 126 aa19.82■□□□□ 0.76
VEGFA-208ENST00000417285 OR56B1Q8NGI3 324 aa19.82■□□□□ 0.76
VEGFA-208ENST00000417285 OR5M8Q8NGP6 311 aa19.82■□□□□ 0.76
VEGFA-208ENST00000417285 RBMXL1Q96E39 390 aaKnown RBP19.82■□□□□ 0.76
VEGFA-208ENST00000417285 ARHGAP5-AS1Q96IT6 56 aa19.82■□□□□ 0.76
VEGFA-208ENST00000417285 DUX3Q96PT4 197 aa19.82■□□□□ 0.76
VEGFA-208ENST00000417285 HDHD3Q9BSH5 251 aaPredicted RBP19.82■□□□□ 0.76
VEGFA-208ENST00000417285 SLC23A1Q9UHI7 598 aa19.82■□□□□ 0.76
VEGFA-208ENST00000417285 DENRO43583 198 aaKnown RBP19.81■□□□□ 0.76
VEGFA-208ENST00000417285 RAMP3O60896 148 aa19.81■□□□□ 0.76
VEGFA-208ENST00000417285 SLC2A2P11168 524 aaPredicted RBP19.81■□□□□ 0.76
VEGFA-208ENST00000417285 TMEM50BP56557 158 aa19.81■□□□□ 0.76
VEGFA-208ENST00000417285 RAB25P57735 213 aa19.81■□□□□ 0.76
VEGFA-208ENST00000417285 LIN54Q6MZP7 749 aa19.81■□□□□ 0.76
VEGFA-208ENST00000417285 TMEM65Q6PI78 240 aa19.81■□□□□ 0.76
VEGFA-208ENST00000417285 NPBQ8NG41 125 aa19.81■□□□□ 0.76
VEGFA-208ENST00000417285 C4orf3Q8WVX3 66 aa19.81■□□□□ 0.76
VEGFA-208ENST00000417285 PECRQ9BY49 303 aa19.81■□□□□ 0.76
VEGFA-208ENST00000417285 OR51J1Q9H342 316 aa19.81■□□□□ 0.76
VEGFA-208ENST00000417285 NDUFB11Q9NX14 153 aa19.81■□□□□ 0.76
VEGFA-208ENST00000417285 TENM3Q9P273 2699 aa19.81■□□□□ 0.76
VEGFA-208ENST00000417285 TRAV1-2A0A0B4J238 106 aa19.8■□□□□ 0.76
VEGFA-208ENST00000417285 ITGB1BP1O14713 200 aa19.8■□□□□ 0.76
VEGFA-208ENST00000417285 NBR2O15453 112 aa19.8■□□□□ 0.76
VEGFA-208ENST00000417285 HSPA12AO43301 675 aa19.8■□□□□ 0.76
VEGFA-208ENST00000417285 ATP6V1G2O95670 118 aa19.8■□□□□ 0.76
VEGFA-208ENST00000417285 ZBTB25P24278 435 aa19.8■□□□□ 0.76
VEGFA-208ENST00000417285 MYL9P24844 172 aa19.8■□□□□ 0.76
VEGFA-208ENST00000417285 GABARAPL2P60520 117 aa19.8■□□□□ 0.76
VEGFA-208ENST00000417285 C5orf64Q2M2E5 130 aa19.8■□□□□ 0.76
VEGFA-208ENST00000417285 VAX1Q5SQQ9 334 aa19.8■□□□□ 0.76
VEGFA-208ENST00000417285 HES5Q5TA89 166 aa19.8■□□□□ 0.76
VEGFA-208ENST00000417285 EDARADDQ8WWZ3 215 aa19.8■□□□□ 0.76
VEGFA-208ENST00000417285 RITA1Q96K30 269 aa19.8■□□□□ 0.76
VEGFA-208ENST00000417285 CMSS1Q9BQ75 279 aaKnown RBP19.8■□□□□ 0.76
VEGFA-208ENST00000417285 Q9N2K0 584 aa19.8■□□□□ 0.76
VEGFA-208ENST00000417285 KIAA1456Q9P272 454 aa19.8■□□□□ 0.76
VEGFA-208ENST00000417285 RAB22AQ9UL26 194 aa19.8■□□□□ 0.76
VEGFA-208ENST00000417285 LDLRAD4O15165 306 aa19.79■□□□□ 0.76
VEGFA-208ENST00000417285 MRPS14O60783 128 aaKnown RBP19.79■□□□□ 0.76
VEGFA-208ENST00000417285 UBE2E2Q96LR5 201 aa19.79■□□□□ 0.76
VEGFA-208ENST00000417285 TMEM272A0A1B0GTI8 110 aa19.78■□□□□ 0.76
VEGFA-208ENST00000417285 PPIFP30405 207 aaKnown RBP19.78■□□□□ 0.76
VEGFA-208ENST00000417285 MC5RP33032 325 aa19.78■□□□□ 0.76
VEGFA-208ENST00000417285 CEACAM6P40199 344 aa19.78■□□□□ 0.76
VEGFA-208ENST00000417285 MRPS15P82914 257 aaKnown RBP19.78■□□□□ 0.76
VEGFA-208ENST00000417285 DEFB136Q30KP8 78 aa19.78■□□□□ 0.76
VEGFA-208ENST00000417285 CD200R1LQ6Q8B3 271 aa19.78■□□□□ 0.76
VEGFA-208ENST00000417285 MYOZ3Q8TDC0 251 aa19.78■□□□□ 0.76
VEGFA-208ENST00000417285 Q9H521 79 aa19.78■□□□□ 0.76
VEGFA-208ENST00000417285 WSB1Q9Y6I7 421 aa19.78■□□□□ 0.76
VEGFA-208ENST00000417285 TRDV1A0A1B0GX56 115 aa19.77■□□□□ 0.76
VEGFA-208ENST00000417285 CNTFRP26992 372 aa19.77■□□□□ 0.76
VEGFA-208ENST00000417285 RPL39P5Q59GN2 51 aa19.77■□□□□ 0.76
VEGFA-208ENST00000417285 PLAC9Q5JTB6 97 aa19.77■□□□□ 0.76
VEGFA-208ENST00000417285 C9orf66Q5T8R8 295 aa19.77■□□□□ 0.76
VEGFA-208ENST00000417285 B9D2Q9BPU9 175 aa19.77■□□□□ 0.76
VEGFA-208ENST00000417285 OR1A1Q9P1Q5 309 aa19.77■□□□□ 0.76
VEGFA-208ENST00000417285 IGHV7-81A0A0B4J1V7 117 aa19.76■□□□□ 0.75
VEGFA-208ENST00000417285 OR5H14A6NHG9 310 aa19.76■□□□□ 0.75
VEGFA-208ENST00000417285 NDUFA3O95167 84 aa19.76■□□□□ 0.75
VEGFA-208ENST00000417285 IGLV1-40P01703 118 aa19.76■□□□□ 0.75
VEGFA-208ENST00000417285 SCTP09683 121 aa19.76■□□□□ 0.75
VEGFA-208ENST00000417285 GALP22466 123 aa19.76■□□□□ 0.75
VEGFA-208ENST00000417285 CD69Q07108 199 aa19.76■□□□□ 0.75
VEGFA-208ENST00000417285 ZNF660Q6AZW8 331 aaPredicted RBP19.76■□□□□ 0.75
VEGFA-208ENST00000417285 FAM131AQ6UXB0 335 aa19.76■□□□□ 0.75
VEGFA-208ENST00000417285 ABHD14BQ96IU4 210 aa19.76■□□□□ 0.75
VEGFA-208ENST00000417285 RNF5Q99942 180 aa19.76■□□□□ 0.75
VEGFA-208ENST00000417285 AGMATQ9BSE5 352 aa19.76■□□□□ 0.75
VEGFA-208ENST00000417285 PARP12Q9H0J9 701 aaKnown RBP19.76■□□□□ 0.75
VEGFA-208ENST00000417285 C11orf54Q9H0W9 315 aaPredicted RBP19.76■□□□□ 0.75
VEGFA-208ENST00000417285 VSIG4Q9Y279 399 aa19.76■□□□□ 0.75
VEGFA-208ENST00000417285 TRAV41A0A0B4J266 112 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms