RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 ZNF295-AS1Q8N0V1 137 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 ST8SIA1Q92185 356 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 F2Z2F3 143 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 TMEM250H0YL14 139 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 HNRNPA3P51991 378 aaKnown RBP12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 SELENOTP62341 195 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 HBG1P69891 147 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 HBG2P69892 147 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 SERF2P84101 59 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 SHBQ15464 509 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 SPATA45Q537H7 98 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 FFAR4Q5NUL3 377 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 Q6ZRM9 215 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 RABEPKQ7Z6M1 372 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 MCEMP1Q8IX19 187 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 ZDHHC23Q8IYP9 409 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 GJC3Q8NFK1 279 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 ABHD14BQ96IU4 210 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 ALKBH3Q96Q83 286 aaPredicted RBP12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 ALKBH7Q9BT30 221 aaPredicted RBP12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 C3orf80F5H4A9 247 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 G3V3Y1 287 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 TIAF1O95411 115 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 CRISP2P16562 243 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 UCP1P25874 307 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 CENPVQ7Z7K6 275 aaPredicted RBP12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 CLDN23Q96B33 292 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 RAB40CQ96S21 281 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 VPS25Q9BRG1 176 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 WIPI2Q9Y4P8 454 aa12.55□□□□□ -0.4
NCKIPSD-204ENST00000416649 RIF1Q5UIP0 2472 aaKnown RBP12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 A0A0U1RQV5 110 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 NKX6-3A6NJ46 265 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 NPIPB13A6NJU9 1138 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 SLC22A20A6NK97 555 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 CD300LBA8K4G0 201 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 NPIPB4C9JG80 1138 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 SYNGR2O43760 224 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 YPEL1O60688 119 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 PSG2P11465 335 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 GLB1P16278 677 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 SUMO1P63165 101 aaKnown RBP12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 LCN2P80188 198 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 C17orf67Q0P5P2 114 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 LRRC75BQ2VPJ9 315 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 HAPLN4Q86UW8 402 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 PLXDC1Q8IUK5 500 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 LYG1Q8N1E2 194 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 PINX1Q96BK5 328 aaKnown RBP12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 NEIL1Q96FI4 390 aaPredicted RBP12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 YPEL2Q96QA6 119 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 PSMG3Q9BT73 122 aaPredicted RBP12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 DERL1Q9BUN8 251 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 WDR61Q9GZS3 305 aaKnown RBP12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 PTRH2Q9Y3E5 179 aaKnown RBP12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 SVILO95425 2214 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 ITGB1BP1O14713 200 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 MSR1P21757 451 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 SOX8P57073 446 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 HLA-BQ31612 363 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 TAF15Q92804 592 aaKnown RBP eCLIP12.54□□□□□ -0.42e-6■■■□□ 14.6
NCKIPSD-204ENST00000416649 APH1AQ96BI3 265 aa12.54□□□□□ -0.4
NCKIPSD-204ENST00000416649 DIRC3C9JPN6 131 aa12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 C11orf94C9JXX5 98 aa12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 IGHEP01854 428 aa12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 KLF3P57682 345 aaPredicted RBP12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 UBE2NP61088 152 aaKnown RBP12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 ACSM6Q6P461 480 aa12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 SERPINA7P05543 415 aa12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 THBS3P49746 956 aa12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 RSPO1Q2MKA7 263 aaPredicted RBP12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 TMPRSS7Q7RTY8 843 aa12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 OR4C5Q8NGB2 326 aa12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 OR10G9Q8NGN4 311 aa12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 OR10G7Q8NGN6 311 aa12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 PSMF1Q92530 271 aa12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 PIGCQ92535 297 aa12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 SPSB1Q96BD6 273 aa12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 STARD4Q96DR4 205 aa12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 OR6C1Q96RD1 312 aa12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 AKIRIN1Q9H9L7 192 aaPredicted RBP12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 TP53TG3Q9ULZ0 132 aa12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 LAMTOR2Q9Y2Q5 125 aa12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 RNF114Q9Y508 228 aa12.53□□□□□ -0.4
NCKIPSD-204ENST00000416649 LOC102724200A0A096LPH7 203 aaPredicted RBP12.52□□□□□ -0.4
NCKIPSD-204ENST00000416649 IGHV3-15A0A0B4J1V0 119 aa12.52□□□□□ -0.4
NCKIPSD-204ENST00000416649 M0QZ24 198 aa12.52□□□□□ -0.4
NCKIPSD-204ENST00000416649 SH2D1BO14796 132 aa12.52□□□□□ -0.4
NCKIPSD-204ENST00000416649 TLX3O43711 291 aaPredicted RBP12.52□□□□□ -0.4
NCKIPSD-204ENST00000416649 CDKN1BP46527 198 aa12.52□□□□□ -0.4
NCKIPSD-204ENST00000416649 PAFAH1B2P68402 229 aa12.52□□□□□ -0.4
NCKIPSD-204ENST00000416649 CNN3Q15417 329 aaKnown RBP12.52□□□□□ -0.4
NCKIPSD-204ENST00000416649 C17orf82Q86X59 251 aaPredicted RBP12.52□□□□□ -0.4
NCKIPSD-204ENST00000416649 ATOH7Q8N100 152 aa12.52□□□□□ -0.4
NCKIPSD-204ENST00000416649 SIGLECL1Q8N7X8 197 aa12.52□□□□□ -0.4
NCKIPSD-204ENST00000416649 TMEM204Q9BSN7 226 aa12.52□□□□□ -0.4
NCKIPSD-204ENST00000416649 PGLYRP1O75594 196 aaPredicted RBP12.52□□□□□ -0.41
NCKIPSD-204ENST00000416649 NDUFB4O95168 129 aa12.52□□□□□ -0.41
NCKIPSD-204ENST00000416649 NRASP01111 189 aa12.52□□□□□ -0.41
NCKIPSD-204ENST00000416649 CCL7P80098 99 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms