RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 C19orf54Q5BKX5 351 aa7.12□□□□□ -1.27
LINC01238-201ENST00000416204 IL34Q6ZMJ4 242 aa7.12□□□□□ -1.27
LINC01238-201ENST00000416204 DEFB125Q8N687 156 aa7.12□□□□□ -1.27
LINC01238-201ENST00000416204 OR51A2Q8NGJ7 313 aa7.12□□□□□ -1.27
LINC01238-201ENST00000416204 OR4K15Q8NH41 348 aa7.12□□□□□ -1.27
LINC01238-201ENST00000416204 RFKQ969G6 155 aa7.12□□□□□ -1.27
LINC01238-201ENST00000416204 FLYWCH2Q96CP2 140 aaKnown RBP7.12□□□□□ -1.27
LINC01238-201ENST00000416204 LGALS12Q96DT0 336 aa7.12□□□□□ -1.27
LINC01238-201ENST00000416204 ST6GALNAC5Q9BVH7 336 aa7.12□□□□□ -1.27
LINC01238-201ENST00000416204 MND1Q9BWT6 205 aa7.12□□□□□ -1.27
LINC01238-201ENST00000416204 NCOR1P1Q9H4R4 102 aa7.12□□□□□ -1.27
LINC01238-201ENST00000416204 ING4Q9UNL4 249 aa7.12□□□□□ -1.27
LINC01238-201ENST00000416204 ST3GAL6Q9Y274 331 aa7.12□□□□□ -1.27
LINC01238-201ENST00000416204 ERGIC3Q9Y282 383 aa7.12□□□□□ -1.27
LINC01238-201ENST00000416204 A0A1W2PP11 408 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 J3QLW9 94 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 AIPO00170 330 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 TXNL1O43396 289 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 SULT1B1O43704 296 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 AIREO43918 545 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 HBZP02008 142 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 MT-ND4P03905 459 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 TRGV3P03979 118 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 CSTBP04080 98 aaKnown RBP7.11□□□□□ -1.27
LINC01238-201ENST00000416204 ZNF19P17023 458 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 GZMHP20718 246 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 CD81P60033 236 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 CX3CL1P78423 397 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 RAB40BQ12829 278 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 TMED1Q13445 227 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 IL13RA2Q14627 380 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 ZNF846Q147U1 533 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 SPCS2Q15005 226 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 PLGLAQ15195 96 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 ACTBL2Q562R1 376 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 ELP2Q6IA86 826 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 UNQ5815/PRO19632Q6UWF5 114 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 PPP1R27Q86WC6 154 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 C8orf31Q8N9H6 132 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 OR52L2PQ8NGH6 319 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 OR52M1Q8NGK5 317 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 DYNC2LI1Q8TCX1 351 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 THAP7Q9BT49 309 aaPredicted RBP7.11□□□□□ -1.27
LINC01238-201ENST00000416204 WDR12Q9GZL7 423 aaKnown RBP7.11□□□□□ -1.27
LINC01238-201ENST00000416204 RHOFQ9HBH0 211 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 FGF20Q9NP95 211 aaPredicted RBP7.11□□□□□ -1.27
LINC01238-201ENST00000416204 ZNF355PQ9NSJ1 428 aa7.11□□□□□ -1.27
LINC01238-201ENST00000416204 DIMT1Q9UNQ2 313 aaKnown RBP7.11□□□□□ -1.27
LINC01238-201ENST00000416204 EXOSC1Q9Y3B2 195 aaKnown RBP7.11□□□□□ -1.27
LINC01238-201ENST00000416204 OR4C45A6NMZ5 311 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 H0Y980 276 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 LANCL1O43813 399 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 ISG15P05161 165 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 CD7P09564 240 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 SERPINA2P20848 420 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 PPP1CCP36873 323 aaKnown RBP7.1□□□□□ -1.27
LINC01238-201ENST00000416204 SOX2P48431 317 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 KCNJ3P48549 501 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 ZNF137PP52743 207 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 RBM11P57052 281 aaKnown RBP7.1□□□□□ -1.27
LINC01238-201ENST00000416204 EWSR1Q01844 656 aaKnown RBP eCLIP7.1□□□□□ -1.27
LINC01238-201ENST00000416204 DYRK1AQ13627 763 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 GLDNQ6ZMI3 551 aaPredicted RBP7.1□□□□□ -1.27
LINC01238-201ENST00000416204 ZNF497Q6ZNH5 498 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 NANOGP1Q8N7R0 232 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 LFNGQ8NES3 379 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 OR9G4Q8NGQ1 327 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 OR52N1Q8NH53 320 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 TSEN15Q8WW01 171 aaKnown RBP7.1□□□□□ -1.27
LINC01238-201ENST00000416204 RHOVQ96L33 236 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 MGLLQ99685 303 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 CST11Q9H112 138 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 AMBNQ9NP70 447 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 CHCHD3Q9NX63 227 aaKnown RBP7.1□□□□□ -1.27
LINC01238-201ENST00000416204 TAS2R4Q9NYW5 299 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 CCDC59Q9P031 241 aaKnown RBP7.1□□□□□ -1.27
LINC01238-201ENST00000416204 TRAPPC2LQ9UL33 140 aa7.1□□□□□ -1.27
LINC01238-201ENST00000416204 PKHD1P08F94 4074 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 DAPL1A0PJW8 107 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 SHISA3A0PJX4 238 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 MYL12BO14950 172 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 SPINT2O43291 252 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 ORC5O43913 435 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 TRBV12-3P01733 135 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 CSN3P07498 182 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 RCC1P18754 421 aaPredicted RBP7.09□□□□□ -1.27
LINC01238-201ENST00000416204 MYL12AP19105 171 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 PAX5Q02548 391 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 MLLT11Q13015 90 aaPredicted RBP7.09□□□□□ -1.27
LINC01238-201ENST00000416204 SPHARQ15513 63 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 FAM131AQ6UXB0 335 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 LINC00322Q6ZN03 302 aaPredicted RBP7.09□□□□□ -1.27
LINC01238-201ENST00000416204 ODF3L1Q8IXM7 274 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 PXT1Q8NFP0 134 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 OR5T1Q8NG75 326 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 OR5D14Q8NGL3 314 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 GRPEL2Q8TAA5 225 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 ORAI1Q96D31 301 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 PELI1Q96FA3 418 aa7.09□□□□□ -1.27
LINC01238-201ENST00000416204 C4orf36Q96KX1 117 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms