RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 NPBQ8NG41 125 aa13.75□□□□□ -0.21
PDLIM2-208ENST00000416159 OR5M8Q8NGP6 311 aa13.75□□□□□ -0.21
PDLIM2-208ENST00000416159 C4orf3Q8WVX3 66 aa13.75□□□□□ -0.21
PDLIM2-208ENST00000416159 ANKRD60Q9BZ19 345 aa13.75□□□□□ -0.21
PDLIM2-208ENST00000416159 SLC23A1Q9UHI7 598 aa13.75□□□□□ -0.21
PDLIM2-208ENST00000416159 HSF4Q9ULV5 492 aa13.75□□□□□ -0.21
PDLIM2-208ENST00000416159 AK6Q9Y3D8 172 aaKnown RBP13.75□□□□□ -0.21
PDLIM2-208ENST00000416159 IGHV7-81A0A0B4J1V7 117 aa13.74□□□□□ -0.21
PDLIM2-208ENST00000416159 ST8SIA5O15466 376 aa13.74□□□□□ -0.21
PDLIM2-208ENST00000416159 SOCS1O15524 211 aa13.74□□□□□ -0.21
PDLIM2-208ENST00000416159 RAMP3O60896 148 aa13.74□□□□□ -0.21
PDLIM2-208ENST00000416159 NDUFA3O95167 84 aa13.74□□□□□ -0.21
PDLIM2-208ENST00000416159 CPEP16870 476 aa13.74□□□□□ -0.21
PDLIM2-208ENST00000416159 CNTFRP26992 372 aa13.74□□□□□ -0.21
PDLIM2-208ENST00000416159 PPIFP30405 207 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-208ENST00000416159 RPS25P62851 125 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-208ENST00000416159 P2RY14Q15391 338 aa13.74□□□□□ -0.21
PDLIM2-208ENST00000416159 DEFB136Q30KP8 78 aa13.74□□□□□ -0.21
PDLIM2-208ENST00000416159 GFI1Q99684 422 aa13.74□□□□□ -0.21
PDLIM2-208ENST00000416159 CCDC90BQ9GZT6 254 aa13.74□□□□□ -0.21
PDLIM2-208ENST00000416159 AK3Q9UIJ7 227 aa13.74□□□□□ -0.21
PDLIM2-208ENST00000416159 WSB1Q9Y6I7 421 aa13.74□□□□□ -0.21
PDLIM2-208ENST00000416159 ATP6V0E1O15342 81 aa13.73□□□□□ -0.21
PDLIM2-208ENST00000416159 MC5RP33032 325 aa13.73□□□□□ -0.21
PDLIM2-208ENST00000416159 RAB11BQ15907 218 aa13.73□□□□□ -0.21
PDLIM2-208ENST00000416159 VAX1Q5SQQ9 334 aa13.73□□□□□ -0.21
PDLIM2-208ENST00000416159 C9orf66Q5T8R8 295 aa13.73□□□□□ -0.21
PDLIM2-208ENST00000416159 PRSS48Q7RTY5 328 aa13.73□□□□□ -0.21
PDLIM2-208ENST00000416159 MYOZ3Q8TDC0 251 aa13.73□□□□□ -0.21
PDLIM2-208ENST00000416159 EDARADDQ8WWZ3 215 aa13.73□□□□□ -0.21
PDLIM2-208ENST00000416159 UBE2E2Q96LR5 201 aa13.73□□□□□ -0.21
PDLIM2-208ENST00000416159 PARP11Q9NR21 331 aa13.73□□□□□ -0.21
PDLIM2-208ENST00000416159 TRAV41A0A0B4J266 112 aa13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 OR5H14A6NHG9 310 aa13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 G3V318 75 aa13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 CT45A6P0DMU7 189 aa13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 CT45A5P0DMU8 189 aa13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 CT45A7P0DMV0 189 aa13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 ZBTB25P24278 435 aa13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 CRHBPP24387 322 aa13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 CEACAM6P40199 344 aa13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 PSMD7P51665 324 aa13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 TMEM50BP56557 158 aa13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 HLA-DRB3P79483 266 aa13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 RPL39P5Q59GN2 51 aa13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 FAM131AQ6UXB0 335 aa13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 ZNF491Q8N8L2 437 aa13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 MGLLQ99685 303 aa13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 HDHD3Q9BSH5 251 aaPredicted RBP13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 VCX3BQ9H321 246 aa13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 Q9N2K0 584 aa13.72□□□□□ -0.21
PDLIM2-208ENST00000416159 FOXI3A8MTJ6 420 aaPredicted RBP13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 RRHO14718 337 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 HSPA12AO43301 675 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 RBBP9O75884 186 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 IGLV1-40P01703 118 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 CALRP27797 417 aaKnown RBP13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 VEGFCP49767 419 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 CD69Q07108 199 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 FHL3Q13643 280 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 C2orf76Q3KRA6 126 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 ZNF660Q6AZW8 331 aaPredicted RBP13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 OR11H1Q8NG94 326 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 OR56B1Q8NGI3 324 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 FAM3DQ96BQ1 224 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 ABHD14BQ96IU4 210 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 RNF5Q99942 180 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 B9D2Q9BPU9 175 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 CMSS1Q9BQ75 279 aaKnown RBP13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 AGMATQ9BSE5 352 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 PECRQ9BY49 303 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 PARP12Q9H0J9 701 aaKnown RBP13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 C11orf54Q9H0W9 315 aaPredicted RBP13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 KLK15Q9H2R5 256 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 ACOT13Q9NPJ3 140 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 VSIG4Q9Y279 399 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 V9GY05 133 aa13.71□□□□□ -0.21
PDLIM2-208ENST00000416159 H0YJW9 148 aa13.7□□□□□ -0.22
PDLIM2-208ENST00000416159 GSTP1P09211 210 aaKnown RBP13.7□□□□□ -0.22
PDLIM2-208ENST00000416159 MAP2K4P45985 399 aa13.7□□□□□ -0.22
PDLIM2-208ENST00000416159 RAB9AP51151 201 aa13.7□□□□□ -0.22
PDLIM2-208ENST00000416159 RUNX1Q01196 453 aa13.7□□□□□ -0.22
PDLIM2-208ENST00000416159 FABP5Q01469 135 aa13.7□□□□□ -0.22
PDLIM2-208ENST00000416159 KIAA0141Q14154 515 aaPredicted RBP13.7□□□□□ -0.22
PDLIM2-208ENST00000416159 MINDY2Q8NBR6 621 aa13.7□□□□□ -0.22
PDLIM2-208ENST00000416159 OR5AN1Q8NGI8 311 aa13.7□□□□□ -0.22
PDLIM2-208ENST00000416159 OR1N2Q8NGR9 330 aa13.7□□□□□ -0.22
PDLIM2-208ENST00000416159 PTX4Q96A99 478 aa13.7□□□□□ -0.22
PDLIM2-208ENST00000416159 ARHGAP5-AS1Q96IT6 56 aa13.7□□□□□ -0.22
PDLIM2-208ENST00000416159 FBXL15Q9H469 300 aa13.7□□□□□ -0.22
PDLIM2-208ENST00000416159 C12orf4Q9NQ89 552 aa13.7□□□□□ -0.22
PDLIM2-208ENST00000416159 OR1A1Q9P1Q5 309 aa13.7□□□□□ -0.22
PDLIM2-208ENST00000416159 WASHC3Q9Y3C0 194 aa13.7□□□□□ -0.22
PDLIM2-208ENST00000416159 SEC14L6B5MCN3 397 aa13.69□□□□□ -0.22
PDLIM2-208ENST00000416159 H7C2Y5 167 aa13.69□□□□□ -0.22
PDLIM2-208ENST00000416159 I3L521 148 aa13.69□□□□□ -0.22
PDLIM2-208ENST00000416159 DENRO43583 198 aaKnown RBP13.69□□□□□ -0.22
PDLIM2-208ENST00000416159 SCTP09683 121 aa13.69□□□□□ -0.22
PDLIM2-208ENST00000416159 OR8U8P0C7N1 319 aa13.69□□□□□ -0.22
PDLIM2-208ENST00000416159 HSPA13P48723 471 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms