RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 TMEM255AQ5JRV8 349 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 DHRS7CA6NNS2 312 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 IGHV3-48P01763 117 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 CRHP06850 196 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 VAMP3Q15836 100 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 OR2D3Q8NGH3 330 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 RTN4RQ9BZR6 473 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 SF3B6Q9Y3B4 125 aaKnown RBP9.16□□□□□ -0.94
COL12A1-203ENST00000416123 SMIM10L1P0DMW3 83 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 SMIM10Q96HG1 83 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 INTS1Q8N201 2190 aaKnown RBP9.16□□□□□ -0.94
COL12A1-203ENST00000416123 A0A1W2PR77 199 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 GAPDHP04406 335 aaKnown RBP9.16□□□□□ -0.94
COL12A1-203ENST00000416123 SLC35E3Q7Z769 313 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 TMEM105Q8N8V8 129 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 C16orf92Q96LL3 132 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 LRP11Q86VZ4 500 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 ST6GAL2Q96JF0 529 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 NPAS1Q99742 590 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 MRPL37Q9BZE1 423 aaKnown RBP9.16□□□□□ -0.94
COL12A1-203ENST00000416123 LPAR5Q9H1C0 372 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 IL36RNQ9UBH0 155 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 CEACAM18A8MTB9 384 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 HOXD4P09016 255 aaPredicted RBP9.16□□□□□ -0.94
COL12A1-203ENST00000416123 CLLU1Q5K131 121 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 LDLRAD3Q86YD5 345 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 NFAM1Q8NET5 270 aaPredicted RBP9.16□□□□□ -0.94
COL12A1-203ENST00000416123 OR8G5Q8NG78 346 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 ZNF552Q9H707 407 aaPredicted RBP9.16□□□□□ -0.94
COL12A1-203ENST00000416123 A0A1B0GU03 582 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 HELTA6NFD8 242 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 OR10D4PQ8NGN7 298 aa9.16□□□□□ -0.94
COL12A1-203ENST00000416123 NPIPB8E9PQR5 432 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 MFNGO00587 321 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 M0R2Z0 102 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 TWIST1Q15672 202 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 MRPL54Q6P161 138 aaKnown RBP9.15□□□□□ -0.94
COL12A1-203ENST00000416123 VWA1Q6PCB0 445 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 HOGA1Q86XE5 327 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 Q9N2K0 584 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 HMSDA8MTL9 139 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 MBPP02686 304 aaPredicted RBP9.15□□□□□ -0.94
COL12A1-203ENST00000416123 MPV17P39210 176 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 RAG2P55895 527 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 KLRB1Q12918 225 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 IRF3Q14653 427 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 FAM181AQ8N9Y4 354 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 CLRN3Q8NCR9 226 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 TIMP4Q99727 224 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 HIGD1AQ9Y241 93 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 TMEM229AB2RXF0 380 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 ZNF658BQ4V348 819 aaPredicted RBP9.15□□□□□ -0.94
COL12A1-203ENST00000416123 SPSB2Q99619 263 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 RAXQ9Y2V3 346 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 RGS13O14921 159 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 HOXA4Q00056 320 aaPredicted RBP9.15□□□□□ -0.94
COL12A1-203ENST00000416123 FAM210BQ96KR6 192 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 LURAP1Q96LR2 239 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 PRDM14Q9GZV8 571 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 SIP14410 1827 aa9.15□□□□□ -0.94
COL12A1-203ENST00000416123 PPIAL4CA0A0B4J2A2 164 aa9.15□□□□□ -0.95
COL12A1-203ENST00000416123 PPIAL4GP0DN37 164 aa9.15□□□□□ -0.95
COL12A1-203ENST00000416123 FAM27E3Q08E93 113 aa9.15□□□□□ -0.95
COL12A1-203ENST00000416123 CSRP2Q16527 193 aa9.15□□□□□ -0.95
COL12A1-203ENST00000416123 ZNF426Q9BUY5 554 aa9.15□□□□□ -0.95
COL12A1-203ENST00000416123 LOC105371242A0A075B767 164 aa9.15□□□□□ -0.95
COL12A1-203ENST00000416123 DLK1P80370 383 aa9.15□□□□□ -0.95
COL12A1-203ENST00000416123 PRB3Q04118 309 aaPredicted RBP9.15□□□□□ -0.95
COL12A1-203ENST00000416123 PPP1R32Q7Z5V6 425 aa9.15□□□□□ -0.95
COL12A1-203ENST00000416123 RSG1Q9BU20 258 aa9.15□□□□□ -0.95
COL12A1-203ENST00000416123 CXorf1O96002 111 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 LGALSLQ3ZCW2 172 aaPredicted RBP9.14□□□□□ -0.95
COL12A1-203ENST00000416123 GCM2O75603 506 aaPredicted RBP9.14□□□□□ -0.95
COL12A1-203ENST00000416123 PRSS1P07477 247 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 ZNF79Q15937 498 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 MRGPRGQ86SM5 289 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 MUC15Q8N387 334 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 ABHD17AQ96GS6 310 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 TOLLIPQ9H0E2 274 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 RALYQ9UKM9 306 aaKnown RBP9.14□□□□□ -0.95
COL12A1-203ENST00000416123 HNRNPA3P51991 378 aaKnown RBP9.14□□□□□ -0.95
COL12A1-203ENST00000416123 SLC35B1P78383 322 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 NAT8Q9UHE5 227 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 CACNA1EQ15878 2313 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 CDK2AP1O14519 115 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 LRRC75AQ8NAA5 344 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 TMEM116Q8NCL8 245 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 ANAPC1Q9H1A4 1944 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 HIST1H1EP10412 219 aaKnown RBP9.14□□□□□ -0.95
COL12A1-203ENST00000416123 SHISA5Q8N114 240 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 SLC25A17O43808 307 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 RAMP1O60894 148 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 EIF3GO75821 320 aaKnown RBP eCLIP9.14□□□□□ -0.95
COL12A1-203ENST00000416123 ID1P41134 155 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 ROM1Q03395 351 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 C19orf35Q6ZS72 473 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 OR10G8Q8NGN5 311 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 PAXXQ9BUH6 204 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 RBKSQ9H477 322 aa9.14□□□□□ -0.95
COL12A1-203ENST00000416123 CHD3Q12873 2000 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms