RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 UFC1Q9Y3C8 167 aa4.38□□□□□ -1.71
LMBR1-204ENST00000415428 ZNF705FA8MVS1 300 aaPredicted RBP4.38□□□□□ -1.71
LMBR1-204ENST00000415428 ZNF670-ZNF695F2Z2N8 137 aa4.38□□□□□ -1.71
LMBR1-204ENST00000415428 GABRPO00591 440 aa4.38□□□□□ -1.71
LMBR1-204ENST00000415428 DYNC1I1O14576 645 aa4.38□□□□□ -1.71
LMBR1-204ENST00000415428 SLC31A2O15432 143 aa4.38□□□□□ -1.71
LMBR1-204ENST00000415428 ZNF705DP0CH99 300 aaPredicted RBP4.38□□□□□ -1.71
LMBR1-204ENST00000415428 ZNF705BP0CI00 300 aaPredicted RBP4.38□□□□□ -1.71
LMBR1-204ENST00000415428 CLUP10909 449 aa4.38□□□□□ -1.71
LMBR1-204ENST00000415428 EDDM3BP56851 147 aa4.38□□□□□ -1.71
LMBR1-204ENST00000415428 GABPB1Q06547 395 aaPredicted RBP4.38□□□□□ -1.71
LMBR1-204ENST00000415428 ARFRP1Q13795 201 aa4.38□□□□□ -1.71
LMBR1-204ENST00000415428 ZNF705AQ6ZN79 300 aaPredicted RBP4.38□□□□□ -1.71
LMBR1-204ENST00000415428 RRM2BQ7LG56 351 aa4.38□□□□□ -1.71
LMBR1-204ENST00000415428 SLC16A13Q7RTY0 426 aa4.38□□□□□ -1.71
LMBR1-204ENST00000415428 ERI1Q8IV48 349 aaKnown RBP4.38□□□□□ -1.71
LMBR1-204ENST00000415428 C17orf53Q8N3J3 647 aaPredicted RBP4.38□□□□□ -1.71
LMBR1-204ENST00000415428 OR10X1Q8NGY0 326 aa4.38□□□□□ -1.71
LMBR1-204ENST00000415428 CCDC140Q96MF4 163 aa4.38□□□□□ -1.71
LMBR1-204ENST00000415428 LAMP5Q9UJQ1 280 aa4.38□□□□□ -1.71
LMBR1-204ENST00000415428 HSF4Q9ULV5 492 aa4.38□□□□□ -1.71
LMBR1-204ENST00000415428 FAM32AQ9Y421 112 aaKnown RBP4.38□□□□□ -1.71
LMBR1-204ENST00000415428 TRBV5-7A0A0A0MS05 114 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 C15orf62A8K5M9 175 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 H3BSH0 61 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 RAB29O14966 203 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 ST8SIA5O15466 376 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 PROP1O75360 226 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 FOLR2P14207 255 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 MYOD1P15172 320 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 PRKACAP17612 351 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 CRHBPP24387 322 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 MNAT1P51948 309 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 LINC00205P59089 165 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 ZNF66Q6ZN08 573 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 SLC38A6Q8IZM9 456 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 FYTTD1Q96QD9 318 aaKnown RBP4.37□□□□□ -1.71
LMBR1-204ENST00000415428 KIF25Q9UIL4 384 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 NDUFA4O00483 81 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 ZNF85Q03923 595 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 RBM39Q14498 530 aaKnown RBP4.37□□□□□ -1.71
LMBR1-204ENST00000415428 ACTBL2Q562R1 376 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 SPSB3Q6PJ21 355 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.37□□□□□ -1.71
LMBR1-204ENST00000415428 SLC35F2Q8IXU6 374 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 ZNF502Q8TBZ5 544 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 TRMT10AQ8TBZ6 339 aaKnown RBP4.37□□□□□ -1.71
LMBR1-204ENST00000415428 TRUB1Q8WWH5 349 aaKnown RBP4.37□□□□□ -1.71
LMBR1-204ENST00000415428 ACOT12Q8WYK0 555 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 DGCR14Q96DF8 476 aaKnown RBP4.37□□□□□ -1.71
LMBR1-204ENST00000415428 PELI1Q96FA3 418 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 IGHV3-64DA0A0J9YX35 117 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 CD7P09564 240 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 ANXA8P13928 327 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 RRM2P31350 389 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 SNRPGP62308 76 aaKnown RBP4.37□□□□□ -1.71
LMBR1-204ENST00000415428 HSD17B13Q7Z5P4 300 aaPredicted RBP4.37□□□□□ -1.71
LMBR1-204ENST00000415428 FAM89BQ8N5H3 189 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 ASCC1Q8N9N2 400 aaKnown RBP4.37□□□□□ -1.71
LMBR1-204ENST00000415428 FAM81AQ8TBF8 368 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 MRPL20Q9BYC9 149 aaKnown RBP4.37□□□□□ -1.71
LMBR1-204ENST00000415428 PLEKHA3Q9HB20 300 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 ARL8BQ9NVJ2 186 aa4.37□□□□□ -1.71
LMBR1-204ENST00000415428 PAK1IP1Q9NWT1 392 aaPredicted RBP4.37□□□□□ -1.71
LMBR1-204ENST00000415428 WNK2Q9Y3S1 2297 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 SERPINA3P01011 423 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 IFNA4P05014 189 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 QRFPP83859 136 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 ZNF322Q6U7Q0 402 aaPredicted RBP4.36□□□□□ -1.71
LMBR1-204ENST00000415428 ZNRF2Q8NHG8 242 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 ADTRPQ96IZ2 230 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 Q96M66 194 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 INTS9Q9NV88 658 aaKnown RBP4.36□□□□□ -1.71
LMBR1-204ENST00000415428 SAA2-SAA4A0A096LPE2 208 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 HMGB1P1B2RPK0 211 aaPredicted RBP4.36□□□□□ -1.71
LMBR1-204ENST00000415428 EPM2AB3EWF7 344 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 MITFO75030 526 aaPredicted RBP4.36□□□□□ -1.71
LMBR1-204ENST00000415428 RBMY1A1P0DJD3 496 aaKnown RBP4.36□□□□□ -1.71
LMBR1-204ENST00000415428 RBMY1CP0DJD4 496 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 SAA2P0DJI9 122 aaPredicted RBP4.36□□□□□ -1.71
LMBR1-204ENST00000415428 CD24P25063 80 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 HOXA1P49639 335 aaPredicted RBP4.36□□□□□ -1.71
LMBR1-204ENST00000415428 CDK10Q15131 360 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 RBMY1FQ15415 496 aaKnown RBP4.36□□□□□ -1.71
LMBR1-204ENST00000415428 C1orf134Q5TEV5 83 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 SPATA31B1PQ5VZV4 182 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 PLEKHG7Q6ZR37 379 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 ZNF575Q86XF7 245 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 IQCF1Q8N6M8 205 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 OSR1Q8TAX0 266 aaPredicted RBP4.36□□□□□ -1.71
LMBR1-204ENST00000415428 NTN5Q8WTR8 489 aaPredicted RBP4.36□□□□□ -1.71
LMBR1-204ENST00000415428 RCN3Q96D15 328 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 FANCD2OSQ96PS1 177 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 CENPMQ9NSP4 180 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 LOC107986453A0A1B0GWG9 222 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 RBMXL2O75526 392 aaKnown RBP4.36□□□□□ -1.71
LMBR1-204ENST00000415428 RANBP1P43487 201 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 SERPINB10P48595 397 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 GLYATQ6IB77 296 aa4.36□□□□□ -1.71
LMBR1-204ENST00000415428 OR2G2Q8NGZ5 317 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms