RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 FAM189A2Q15884 450 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 C17orf58Q2M2W7 97 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 LDLRAD2Q5SZI1 272 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 HES5Q5TA89 166 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 RSBN1Q5VWQ0 802 aaPredicted RBP3.93□□□□□ -1.78
VPS41-205ENST00000414632 C22orf42Q6IC83 251 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 RAB12Q6IQ22 244 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 C12orf54Q6X4T0 127 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 LYPD6Q86Y78 171 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 ANKRD13BQ86YJ7 626 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 CHST4Q8NCG5 386 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 OR4K15Q8NH41 348 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 RFESDQ8TAC1 157 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 DPF1Q92782 380 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 SLC25A28Q96A46 364 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 GRAMD2BQ96HH9 432 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 SSX3Q99909 188 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 NICN1Q9BSH3 213 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 SLITRK2Q9H156 845 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 TMEM133Q9H2Q1 129 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 RNF167Q9H6Y7 350 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 HEXA-AS1Q9H8Q6 139 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 SEBOXQ9HB31 216 aaPredicted RBP3.93□□□□□ -1.78
VPS41-205ENST00000414632 PLGRKTQ9HBL7 147 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 ZNF286AQ9HBT8 521 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 ISYNA1Q9NPH2 558 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 NDUFB11Q9NX14 153 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 IL36GQ9NZH8 169 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 HILPDAQ9Y5L2 63 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 PEX16Q9Y5Y5 336 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 LINC00312Q9Y6C7 94 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 NBEAL1Q6ZS30 2694 aa3.93□□□□□ -1.78
VPS41-205ENST00000414632 A0A0A6YYD4 124 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 IGHV2-26A0A0B4J1V2 119 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 A0A0B4J203 849 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 TMEM30CPA0ZSE6 113 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 FUOMA2VDF0 154 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 ZNF729A6NN14 1252 aaPredicted RBP3.92□□□□□ -1.78
VPS41-205ENST00000414632 ODF3BA8MYP8 253 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 CCRL2O00421 344 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 HSPA12AO43301 675 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 GPR137BO60478 399 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 ZNF780AO75290 641 aaPredicted RBP3.92□□□□□ -1.78
VPS41-205ENST00000414632 CSN2P05814 226 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 CD24P25063 80 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 ERP29P30040 261 aaKnown RBP3.92□□□□□ -1.78
VPS41-205ENST00000414632 GABRA5P31644 462 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 IER3P46695 156 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 BPIFB3P59826 476 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 MXD1Q05195 221 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 SRSF4Q08170 494 aaKnown RBP3.92□□□□□ -1.78
VPS41-205ENST00000414632 UNC119Q13432 240 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 GPR176Q14439 515 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 TRAM1Q15629 374 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 RAB11BQ15907 218 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 SSX2Q16385 188 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 MPV17LQ2QL34 196 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 NHLRC3Q5JS37 347 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 C1orf100Q5SVJ3 147 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 UBE2UQ5VVX9 321 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 GLT8D1Q68CQ7 371 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 ZNF626Q68DY1 528 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 C16orf87Q6PH81 154 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 ZNF773Q6PK81 442 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 CENPVQ7Z7K6 275 aaPredicted RBP3.92□□□□□ -1.78
VPS41-205ENST00000414632 TMEM219Q86XT9 240 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 Q8N1X5 172 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 OR51D1Q8NGF3 324 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 OR13D1Q8NGV5 346 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 SPATA3Q8NHX4 192 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 NDNFQ8TB73 568 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 SSMEM1Q8WWF3 244 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 PHYHIPQ92561 330 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 THRSPQ92748 146 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 RBMXL1Q96E39 390 aaKnown RBP3.92□□□□□ -1.78
VPS41-205ENST00000414632 SULT4A1Q9BR01 284 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 UQCC2Q9BRT2 126 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 CLEC7AQ9BXN2 247 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 TMEM59Q9BXS4 323 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 BARHL1Q9BZE3 327 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 OR51E2Q9H255 320 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 GAL3ST2Q9H3Q3 398 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 RHOFQ9HBH0 211 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 CALYQ9NYX4 217 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 IDI2-AS1Q9NZ38 188 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 VPREB3Q9UKI3 123 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 LRRC42Q9Y546 428 aa3.92□□□□□ -1.78
VPS41-205ENST00000414632 VWFP04275 2813 aa3.91□□□□□ -1.78
VPS41-205ENST00000414632 A0A075B6Q4 140 aa3.91□□□□□ -1.78
VPS41-205ENST00000414632 LOC100506127A0A0U1RQW1 187 aa3.91□□□□□ -1.78
VPS41-205ENST00000414632 TMEM272A0A1B0GTI8 110 aa3.91□□□□□ -1.78
VPS41-205ENST00000414632 KBTBD11-OT1A0A1B0GTJ5 212 aa3.91□□□□□ -1.78
VPS41-205ENST00000414632 TRDV1A0A1B0GX56 115 aa3.91□□□□□ -1.78
VPS41-205ENST00000414632 ZNF320A2RRD8 509 aa3.91□□□□□ -1.78
VPS41-205ENST00000414632 TMEM89A2RUT3 159 aa3.91□□□□□ -1.78
VPS41-205ENST00000414632 BTBD17A6NE02 478 aa3.91□□□□□ -1.78
VPS41-205ENST00000414632 TMEM14DPA8MWL7 114 aa3.91□□□□□ -1.78
VPS41-205ENST00000414632 MCRIP1C9JLW8 97 aa3.91□□□□□ -1.78
VPS41-205ENST00000414632 CLDN34H7C241 214 aa3.91□□□□□ -1.78
VPS41-205ENST00000414632 AIPO00170 330 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms