RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 HOXA1P49639 335 aaPredicted RBP9.63□□□□□ -0.87
TRAFD1-202ENST00000412615 SPANXN5Q5MJ07 72 aa9.63□□□□□ -0.87
TRAFD1-202ENST00000412615 LILRB2Q8N423 598 aa9.63□□□□□ -0.87
TRAFD1-202ENST00000412615 DCAF16Q9NXF7 216 aa9.63□□□□□ -0.87
TRAFD1-202ENST00000412615 PUS1Q9Y606 427 aaKnown RBP eCLIP9.63□□□□□ -0.87
TRAFD1-202ENST00000412615 MBD3L4A6NDZ8 208 aaPredicted RBP9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 MBD3L3A6NE82 208 aaPredicted RBP9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 MBD3L5A6NJ08 208 aaPredicted RBP9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 C1orf196B1AJZ1 125 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 SRP19P09132 144 aaKnown RBP9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 SERF2P84101 59 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 ARL16Q0P5N6 197 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 EIF4EBP1Q13541 118 aaPredicted RBP9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 ZNF506Q5JVG8 444 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 LINC00518Q8N0U6 118 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 ZNF808Q8N4W9 903 aaPredicted RBP9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 MBD3L2Q8NHZ7 208 aaPredicted RBP9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 SLC25A15Q9Y619 301 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 RAMP3O60896 148 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 SCAF4O95104 1147 aaKnown RBP9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 KRASP01116 189 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 PTAFRP25105 342 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 GLIPR1P48060 266 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 RPL30P62888 115 aaKnown RBP9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 TNFRSF9Q07011 255 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 ICAM4Q14773 271 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 LRRC75BQ2VPJ9 315 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 KHDC3LQ587J8 217 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 TRAT1Q6PIZ9 186 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 CLDND2Q8NHS1 167 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 LRRC29Q8WV35 223 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 RSG1Q9BU20 258 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 PARD6GQ9BYG4 376 aaPredicted RBP9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 ESRP2Q9H6T0 727 aaKnown RBP9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 HSPB7Q9UBY9 170 aa9.62□□□□□ -0.87
TRAFD1-202ENST00000412615 SPINT2O43291 252 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 PPIHO43447 177 aaKnown RBP9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 DAOP14920 347 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 HOXA4Q00056 320 aaPredicted RBP9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 PAX5Q02548 391 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 ZNF66Q6ZN08 573 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 HAPLN4Q86UW8 402 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 ZFP82Q8N141 532 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 C2CD4CQ8TF44 421 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 TCTEX1D2Q8WW35 142 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 ISOC2Q96AB3 205 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 RBKSQ9H477 322 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 RPRMQ9NS64 109 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 METRNQ9UJH8 293 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 LAMP3Q9UQV4 416 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 CLDN1O95832 211 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 TFF1P04155 84 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 ADH4P08319 380 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 PRDX2P32119 198 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 G6PCP35575 357 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 ZNF816Q0VGE8 651 aaPredicted RBP9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 OR2B11Q5JQS5 317 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 IGFL3Q6UXB1 125 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 TMEM14EPQ6UXP3 125 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 SEM1Q6ZVN7 128 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 ZNF561Q8N587 486 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 OR2Z1Q8NG97 314 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 OR13A1Q8NGR1 328 aa9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 WDR61Q9GZS3 305 aaKnown RBP9.61□□□□□ -0.87
TRAFD1-202ENST00000412615 LRRC30A6NM36 301 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 H3BQ15 152 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 P0C879 139 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 SSTR5P35346 364 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 AKR1D1P51857 326 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 HTD2P86397 168 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 FAM53AQ6NSI3 398 aaPredicted RBP9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 TPRX1Q8N7U7 411 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 MBD3L1Q8WWY6 194 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 PINX1Q96BK5 328 aaKnown RBP9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 C5orf30Q96GV9 206 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 OR4C12Q96R67 309 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 DUSP13Q9UII6 198 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 WASF3Q9UPY6 502 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 A0A1W2PPH5 198 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 C17orf98A8MV24 154 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 S1PR2O95136 353 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 CLDN14O95500 239 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 NUBP1P53384 320 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 CEBPGP53567 150 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 SLC38A11Q08AI6 406 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 HABP2Q14520 560 aaPredicted RBP9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 FAM90A1Q86YD7 464 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 CD177Q8N6Q3 437 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 SVIPQ8NHG7 77 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 PPP1R35Q8TAP8 253 aa9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 HSD17B10Q99714 261 aaKnown RBP9.6□□□□□ -0.87
TRAFD1-202ENST00000412615 ODAMA1E959 279 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 RAB29O14966 203 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 ARG1P05089 322 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 GZMHP20718 246 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 RPL35P42766 123 aaKnown RBP9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 ATP6V1FQ16864 119 aa9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 EIF2S3LQ2VIR3 472 aaKnown RBP9.59□□□□□ -0.87
TRAFD1-202ENST00000412615 TIMM23BQ5SRD1 257 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms