RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 SYNGR2O43760 224 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 YPEL1O60688 119 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 FBXO24O75426 580 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 SULT1A1P50225 295 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 DVL1P1P54792 670 aaPredicted RBP11.35□□□□□ -0.59
LIMS1-205ENST00000410093 TAGLNQ01995 201 aaKnown RBP11.35□□□□□ -0.59
LIMS1-205ENST00000410093 EIF4EBP1Q13541 118 aaPredicted RBP11.35□□□□□ -0.59
LIMS1-205ENST00000410093 GFRALQ6UXV0 394 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 Q6ZRG5 221 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 OR1L1Q8NH94 360 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 C17orf50Q8WW18 174 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 YPEL2Q96QA6 119 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 HRH4Q9H3N8 390 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 UQCC1Q9NVA1 299 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 RNF7Q9UBF6 113 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 RNF150Q9ULK6 438 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 A0A1B0GW64 132 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 ODAMA1E959 279 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 IGSF23A1L1A6 192 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 FAM24AA6NFZ4 105 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 FAM90A9PA6NNJ1 464 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 KIAA1324LA8MWY0 1029 aaPredicted RBP11.35□□□□□ -0.59
LIMS1-205ENST00000410093 TSPAN15O95858 294 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 TNFRSF1AP19438 455 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 BMP5P22003 454 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 LPAR6P43657 344 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 CAMLGP49069 296 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 CEBPDP49716 269 aaPredicted RBP11.35□□□□□ -0.59
LIMS1-205ENST00000410093 HBG1P69891 147 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 HBG2P69892 147 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 PEA15Q15121 130 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 ZNF585BQ52M93 769 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 C5orf24Q7Z6I8 188 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 GCSAMQ8N6F7 178 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 CD177Q8N6Q3 437 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 ATP5SQ99766 215 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 PBDC1Q9BVG4 233 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 PARD6GQ9BYG4 376 aaPredicted RBP11.35□□□□□ -0.59
LIMS1-205ENST00000410093 WFDC1Q9HC57 220 aa11.35□□□□□ -0.59
LIMS1-205ENST00000410093 A0A0G2JNJ9 132 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 C15orf65H3BRN8 121 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 F2RL2O00254 374 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 TXNL1O43396 289 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 SNAPINO95295 136 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 CD5P06127 495 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 CD55P08174 381 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 OR8U8P0C7N1 319 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 IRF2P14316 349 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 MUC1P15941 1255 aaPredicted RBP11.34□□□□□ -0.59
LIMS1-205ENST00000410093 RAB7AP51149 207 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 FGFRL1Q8N441 504 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 RPRMLQ8N4K4 120 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 Q8NA96 180 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 OR5C1Q8NGR4 320 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 MRGPRDQ8TDS7 321 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 C14orf79Q96F83 325 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 LRRC46Q96FV0 321 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 SDSLQ96GA7 329 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 CIB3Q96Q77 187 aaPredicted RBP11.34□□□□□ -0.59
LIMS1-205ENST00000410093 OR2D2Q9H210 308 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 TREM1Q9NP99 234 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 CACNG5Q9UF02 275 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 Q9UFV3 132 aa11.34□□□□□ -0.59
LIMS1-205ENST00000410093 IGKV1D-17A0A075B6S4 117 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 TRAV39A0A0B4J263 110 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 ATP6V1G2-DDX39BF2Z307 99 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 F8W036 122 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 RNASEK-C17orf49H0YIS7 233 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 ABCD4O14678 606 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 RAB29O14966 203 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 CLDN14O95500 239 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 IFNA5P01569 189 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 IGKV1-39P01597 117 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 PRH1P02810 166 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 IGKV1D-39P04432 117 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 KIR2DS2P43631 304 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 GLIPR1P48060 266 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 PAX9P55771 341 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 RAB2AP61019 212 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 TNFAIP6P98066 277 aaPredicted RBP11.33□□□□□ -0.6
LIMS1-205ENST00000410093 DEFA5Q01523 94 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 FAM27E3Q08E93 113 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 FAM209AQ5JX71 171 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 LRP11Q86VZ4 500 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 CISD2Q8N5K1 135 aaKnown RBP11.33□□□□□ -0.6
LIMS1-205ENST00000410093 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.33□□□□□ -0.6
LIMS1-205ENST00000410093 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.33□□□□□ -0.6
LIMS1-205ENST00000410093 C19orf12Q9NSK7 152 aa11.33□□□□□ -0.6
LIMS1-205ENST00000410093 KIAA2026Q5HYC2 2103 aa11.32□□□□□ -0.6
LIMS1-205ENST00000410093 LRRC30A6NM36 301 aa11.32□□□□□ -0.6
LIMS1-205ENST00000410093 RBFOX2O43251 390 aaKnown RBP eCLIP11.32□□□□□ -0.6
LIMS1-205ENST00000410093 CLDN1O95832 211 aa11.32□□□□□ -0.6
LIMS1-205ENST00000410093 IGKV1-5P01602 117 aa11.32□□□□□ -0.6
LIMS1-205ENST00000410093 ZNF16P17020 682 aaPredicted RBP11.32□□□□□ -0.6
LIMS1-205ENST00000410093 GNLYP22749 145 aa11.32□□□□□ -0.6
LIMS1-205ENST00000410093 ATP6V1FQ16864 119 aa11.32□□□□□ -0.6
LIMS1-205ENST00000410093 MSMPQ1L6U9 139 aa11.32□□□□□ -0.6
LIMS1-205ENST00000410093 MOGAT3Q86VF5 341 aa11.32□□□□□ -0.6
LIMS1-205ENST00000410093 OR52L2PQ8NGH6 319 aa11.32□□□□□ -0.6
LIMS1-205ENST00000410093 OR13A1Q8NGR1 328 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms