RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 MIDNQ504T8 468 aa13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 HCP5Q6MZN7 132 aa13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 OR4D10Q8NGI6 311 aa13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 OR10X1Q8NGY0 326 aa13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 SLC6A7Q99884 636 aa13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 C11orf54Q9H0W9 315 aaPredicted RBP13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 HRASLSQ9HDD0 168 aa13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 MCUBQ9NWR8 336 aa13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 CUBNO60494 3623 aa13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 COL6A5A8TX70 2615 aa13.43□□□□□ -0.26
TSPAN4-208ENST00000409531 ODF3BA8MYP8 253 aa13.42□□□□□ -0.26
TSPAN4-208ENST00000409531 TCF21O43680 179 aa13.42□□□□□ -0.26
TSPAN4-208ENST00000409531 SLC22A5O76082 557 aa13.42□□□□□ -0.26
TSPAN4-208ENST00000409531 AADACP22760 399 aa13.42□□□□□ -0.26
TSPAN4-208ENST00000409531 CEACAM3P40198 252 aa13.42□□□□□ -0.26
TSPAN4-208ENST00000409531 CT45A1Q5HYN5 189 aa13.42□□□□□ -0.26
TSPAN4-208ENST00000409531 ZNF660Q6AZW8 331 aaPredicted RBP13.42□□□□□ -0.26
TSPAN4-208ENST00000409531 FAM53AQ6NSI3 398 aaPredicted RBP13.42□□□□□ -0.26
TSPAN4-208ENST00000409531 PDZD9Q8IXQ8 264 aa13.42□□□□□ -0.26
TSPAN4-208ENST00000409531 OR56B4Q8NH76 319 aa13.42□□□□□ -0.26
TSPAN4-208ENST00000409531 CT45A3Q8NHU0 189 aa13.42□□□□□ -0.26
TSPAN4-208ENST00000409531 TMEM158Q8WZ71 300 aa13.42□□□□□ -0.26
TSPAN4-208ENST00000409531 PALMDQ9NP74 551 aa13.42□□□□□ -0.26
TSPAN4-208ENST00000409531 SLC2A8Q9NY64 477 aa13.42□□□□□ -0.26
TSPAN4-208ENST00000409531 PIPOXQ9P0Z9 390 aa13.42□□□□□ -0.26
TSPAN4-208ENST00000409531 NUP50Q9UKX7 468 aa13.42□□□□□ -0.26
TSPAN4-208ENST00000409531 TBL2Q9Y4P3 447 aaKnown RBP13.42□□□□□ -0.26
TSPAN4-208ENST00000409531 FBN1P35555 2871 aaKnown RBP13.42□□□□□ -0.26
TSPAN4-208ENST00000409531 A0A0A6YYJ9 748 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 LINC00854A0A1B0GVQ3 168 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 A0A1W2PPE3 182 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 NPFFO15130 113 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 OR8U9P0C7N5 309 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 HTR1DP28221 377 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 ECI1P42126 302 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 ZNF134P52741 427 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 DEFA1P59665 94 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 DEFA3P59666 94 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 PRB3Q04118 309 aaPredicted RBP13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 SCGB2B2Q4G0G5 96 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 KLF17Q5JT82 389 aaPredicted RBP13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 UTF1Q5T230 341 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 MINOS1Q5TGZ0 78 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 FAAP20Q6NZ36 180 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 LPCAT3Q6P1A2 487 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 OR51S1Q8NGJ8 323 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 OR4P4Q8NGL7 312 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 OR8U1Q8NH10 309 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 TERB2Q8NHR7 220 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 ZNF418Q8TF45 676 aaPredicted RBP13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 MOB3AQ96BX8 217 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 AGMATQ9BSE5 352 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 PARP12Q9H0J9 701 aaKnown RBP13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 ZNF221Q9UK13 617 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 MINOS1-NBL1R4GNA1 71 aa13.41□□□□□ -0.26
TSPAN4-208ENST00000409531 BUB1B-PAK6H3BSN5 160 aa13.4□□□□□ -0.26
TSPAN4-208ENST00000409531 RAB29O14966 203 aa13.4□□□□□ -0.26
TSPAN4-208ENST00000409531 SLC31A2O15432 143 aa13.4□□□□□ -0.26
TSPAN4-208ENST00000409531 ST8SIA5O15466 376 aa13.4□□□□□ -0.26
TSPAN4-208ENST00000409531 LYRM1O43325 122 aa13.4□□□□□ -0.26
TSPAN4-208ENST00000409531 ZNF735P0CB33 412 aa13.4□□□□□ -0.26
TSPAN4-208ENST00000409531 IGHV4-38-2P0DP08 117 aa13.4□□□□□ -0.26
TSPAN4-208ENST00000409531 FXYD4P59646 89 aa13.4□□□□□ -0.26
TSPAN4-208ENST00000409531 ASAH1Q13510 395 aa13.4□□□□□ -0.26
TSPAN4-208ENST00000409531 MZT2BQ6NZ67 158 aa13.4□□□□□ -0.26
TSPAN4-208ENST00000409531 LYG1Q8N1E2 194 aa13.4□□□□□ -0.26
TSPAN4-208ENST00000409531 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.4□□□□□ -0.26
TSPAN4-208ENST00000409531 OR2D2Q9H210 308 aa13.4□□□□□ -0.26
TSPAN4-208ENST00000409531 A0A1W2PRD5 423 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 A0A1W2PRF3 423 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 A0A1W2PRM7 423 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 RNF212BA8MTL3 300 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 LEUTXA8MZ59 168 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 PLA2G10O15496 165 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 GPR12P47775 334 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 ZNF137PP52743 207 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 UCP3P55916 312 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 DCTN2Q13561 401 aaKnown RBP13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 MSMO1Q15800 293 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 FAM71F2Q6NXP2 309 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 IDO2Q6ZQW0 420 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 LHFPL1Q86WI0 220 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 SECTM1Q8WVN6 248 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 SCGB3A2Q96PL1 93 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 S1PR3Q99500 378 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 SLC5A7Q9GZV3 580 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 MS4A7Q9GZW8 240 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 IFI27L2Q9H2X8 130 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 DPM3Q9P2X0 92 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 GAB2Q9UQC2 676 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 IGHV3OR16-10A0A075B7F0 116 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 IGKV1D-13A0A0B4J2D9 117 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 IGKV1-13P0DP09 117 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 SAA4P35542 130 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 IFITM3Q01628 133 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 SURF2Q15527 256 aaPredicted RBP13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 PLA1AQ53H76 456 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 AADACL3Q5VUY0 350 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 ZNF645Q8N7E2 425 aa13.39□□□□□ -0.27
TSPAN4-208ENST00000409531 C22orf15Q8WYQ4 148 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms