RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 TET1Q8NFU7 2136 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 SPTSSAQ969W0 71 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 OR6C1Q96RD1 312 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 COPS7AQ9UBW8 275 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 CHD3Q12873 2000 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 ZDBF2Q9HCK1 2354 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 OTOL1A6NHN0 477 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 SH2D1BO14796 132 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 HMGB3O15347 200 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 TLX3O43711 291 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 TUSC2O75896 110 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 POU2F2P09086 479 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 GNB1P62873 340 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 DEFB103AP81534 67 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 SNAI3Q3KNW1 292 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 TMEM147Q9BVK8 224 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 CACNG5Q9UF02 275 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 IL19Q9UHD0 177 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 PCNX3Q9H6A9 2034 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 KIR2DS5A0A0G2JLQ3 304 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 A0A0G2JNG1 304 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 A0A0G2JRQ6 117 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 FAM90A10PA6NDY2 464 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 FAM90A18PA6NE21 464 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 FAM90A16PA6NEW6 464 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 FAM90A20PA6NIJ5 464 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 FAM90A8PA6NJQ4 464 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 FAM90A7PA6NKC0 464 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 FAM90A22PA8MWA6 464 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 FAM90A12PA8MX19 464 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 FAM90A5PA8MXJ8 464 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 FAM90A23PA8MXZ1 464 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 SNURFLB1AK76 121 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 FAM90A26D6RGX4 464 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 KIR2DS3K7RE56 304 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 ZNF324O75467 553 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 HNRNPA1P09651 372 aaKnown RBP eCLIP4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 NBEAP1P0C6P0 100 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 FAM90A15PP0C7V4 464 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 FAM90A13PP0C7W8 464 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 FAM90A14PP0C7W9 464 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 FAM90A24PP0C7X0 464 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 GLB1P16278 677 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 NPPCP23582 126 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 RBM11P57052 281 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 OR1D5P58170 312 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 TLE1Q04724 770 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 MFAP5Q13361 173 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 KIR2DS5Q14953 304 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 HIST3H3Q16695 136 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 OR4A47Q6IF82 309 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 Q6ZVH6 145 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 ZNF596Q8TC21 504 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 CRISPLD2Q9H0B8 497 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 CCL28Q9NRJ3 127 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 C5orf63A6NC05 138 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 ZNF891A8MT65 544 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 J3QR06 171 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 M0R135 149 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 GALR2O43603 387 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 NDUFB4O95168 129 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 C3orf79P0CE67 100 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 PPP1CAP62136 330 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 RHOBP62745 196 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 C17orf67Q0P5P2 114 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 MYBPHQ13203 477 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 RPEL1Q2QD12 228 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 SPANXN5Q5MJ07 72 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 CARD17Q5XLA6 110 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 MYPOPQ86VE0 399 aaPredicted RBP4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 ZNF799Q96GE5 643 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 SFXN3Q9BWM7 321 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 QTRT1Q9BXR0 403 aaKnown RBP4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 GNB4Q9HAV0 340 aa4.97□□□□□ -1.61
R3HDM1-202ENST00000409478 IGKV1-27A0A075B6S5 117 aa4.96□□□□□ -1.61
R3HDM1-202ENST00000409478 TRAV9-2A0A087WT02 112 aa4.96□□□□□ -1.61
R3HDM1-202ENST00000409478 OTX1P32242 354 aaPredicted RBP4.96□□□□□ -1.61
R3HDM1-202ENST00000409478 VIPR2P41587 438 aa4.96□□□□□ -1.61
R3HDM1-202ENST00000409478 CDC34P49427 236 aaPredicted RBP4.96□□□□□ -1.61
R3HDM1-202ENST00000409478 LGALS4P56470 323 aa4.96□□□□□ -1.61
R3HDM1-202ENST00000409478 HYAL1Q12794 435 aa4.96□□□□□ -1.61
R3HDM1-202ENST00000409478 C2orf27AQ580R0 203 aa4.96□□□□□ -1.61
R3HDM1-202ENST00000409478 Q6ZPA2 131 aa4.96□□□□□ -1.61
R3HDM1-202ENST00000409478 SAXO1Q8IYX7 474 aa4.96□□□□□ -1.61
R3HDM1-202ENST00000409478 OR4P4Q8NGL7 312 aa4.96□□□□□ -1.61
R3HDM1-202ENST00000409478 UHRF2Q96PU4 802 aa4.96□□□□□ -1.61
R3HDM1-202ENST00000409478 RNF114Q9Y508 228 aa4.96□□□□□ -1.61
R3HDM1-202ENST00000409478 TTC28Q96AY4 2481 aa4.96□□□□□ -1.62
R3HDM1-202ENST00000409478 CNTRLQ7Z7A1 2325 aa4.96□□□□□ -1.62
R3HDM1-202ENST00000409478 ALPK2Q86TB3 2170 aa4.96□□□□□ -1.62
R3HDM1-202ENST00000409478 IGKV1D-13A0A0B4J2D9 117 aa4.96□□□□□ -1.62
R3HDM1-202ENST00000409478 A0A1W2PS18 150 aa4.96□□□□□ -1.62
R3HDM1-202ENST00000409478 PRSS47A8MTI9 375 aa4.96□□□□□ -1.62
R3HDM1-202ENST00000409478 H3BML4 177 aa4.96□□□□□ -1.62
R3HDM1-202ENST00000409478 RBFOX2O43251 390 aaKnown RBP eCLIP4.96□□□□□ -1.621e-6■■■■□ 23
R3HDM1-202ENST00000409478 IGKV1-13P0DP09 117 aa4.96□□□□□ -1.62
R3HDM1-202ENST00000409478 PSG1P11464 419 aa4.96□□□□□ -1.62
R3HDM1-202ENST00000409478 PMCHP20382 165 aa4.96□□□□□ -1.62
R3HDM1-202ENST00000409478 S100A7P31151 101 aa4.96□□□□□ -1.62
R3HDM1-202ENST00000409478 IER3P46695 156 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms