RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 FAM24AA6NFZ4 105 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 AGPAT2O15120 278 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 CNOT4O95628 575 aaKnown RBP12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 HAND1O96004 215 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 CEACAM1P13688 526 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 FHITP49789 147 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 C1orf162Q8NEQ5 155 aaPredicted RBP12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 OR8G5Q8NG78 346 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 PLEKHA2Q9HB19 425 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 PARP11Q9NR21 331 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 PROCRQ9UNN8 238 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 ACACAQ13085 2346 aa12.79□□□□□ -0.36
SCAMP4-202ENST00000409472 KLK10O43240 276 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 TIMM8AO60220 97 aaPredicted RBP12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 C1QL1O75973 258 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 IGLV1-44P01699 117 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 CTXN2P0C2S0 81 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 PSG2P11465 335 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 ODF3L1Q8IXM7 274 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 BOD1Q96IK1 185 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 HES4Q9HCC6 221 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 CACNA1DQ01668 2161 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 H0Y980 276 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 PPP1R2P9O14990 202 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 GPR137BO60478 399 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 PTBP3O95758 552 aaKnown RBP12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 GAPDHP04406 335 aaKnown RBP12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 EPHA1P21709 976 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 OMGP23515 440 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 F2RP25116 425 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 RTP5Q14D33 572 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 BTNL8Q6UX41 500 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 UNQ6494/PRO21346Q6UXR6 183 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 BHLHA15Q7RTS1 189 aaPredicted RBP12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 LRP11Q86VZ4 500 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 TPRX1Q8N7U7 411 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 RBMXL3Q8N7X1 1067 aaKnown RBP12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 OR5R1Q8NH85 324 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 NOL4LQ96MY1 436 aaPredicted RBP12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 PRO1933Q9H354 126 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 DOK5Q9P104 306 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 TAAR3PQ9P1P4 343 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 PPP1R3CQ9UQK1 317 aa12.78□□□□□ -0.36
SCAMP4-202ENST00000409472 MBD3L4A6NDZ8 208 aaPredicted RBP12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 MBD3L3A6NE82 208 aaPredicted RBP12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 MBD3L5A6NJ08 208 aaPredicted RBP12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 MARCH11A6NNE9 402 aa12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 AHRRA9YTQ3 701 aa12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 C9JQL5 133 aa12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 IGKV1-39P01597 117 aa12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 IGKV1D-39P04432 117 aa12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 NKX2-1P43699 371 aaPredicted RBP12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 RPS10P46783 165 aaKnown RBP12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 P2RY1P47900 373 aa12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 SULT1A2P50226 295 aa12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 SRPXP78539 464 aa12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 EWSR1Q01844 656 aaKnown RBP eCLIP12.77□□□□□ -0.362e-6■■■□□ 17.5
SCAMP4-202ENST00000409472 SPRNQ5BIV9 151 aa12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 CYB5R2Q6BCY4 276 aa12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 ZNF474Q6S9Z5 364 aaPredicted RBP12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 WDR82Q6UXN9 313 aa12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 HEPN1Q6WQI6 88 aa12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 Q6ZRG5 221 aa12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 Q8IYB0 196 aa12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 CMTM1Q8IZ96 169 aa12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 HSD17B11Q8NBQ5 300 aa12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 MBD3L2Q8NHZ7 208 aaPredicted RBP12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 C19orf12Q9NSK7 152 aa12.77□□□□□ -0.36
SCAMP4-202ENST00000409472 JTBO76095 146 aa12.77□□□□□ -0.37
SCAMP4-202ENST00000409472 HNF4GQ14541 408 aa12.77□□□□□ -0.37
SCAMP4-202ENST00000409472 COMMD1Q8N668 190 aa12.77□□□□□ -0.37
SCAMP4-202ENST00000409472 BEND2Q8NDZ0 799 aa12.77□□□□□ -0.37
SCAMP4-202ENST00000409472 OR10V1Q8NGI7 309 aa12.77□□□□□ -0.37
SCAMP4-202ENST00000409472 OR1L1Q8NH94 360 aa12.77□□□□□ -0.37
SCAMP4-202ENST00000409472 SPOCK3Q9BQ16 436 aa12.77□□□□□ -0.37
SCAMP4-202ENST00000409472 ICE1Q9Y2F5 2266 aa12.77□□□□□ -0.37
SCAMP4-202ENST00000409472 OR5H1A6NKK0 313 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 OR8U9P0C7N5 309 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 ZNF83P51522 516 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 AESQ08117 197 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 GNMTQ14749 295 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 Q6ZRM9 215 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 Q6ZS92 163 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 OR5D13Q8NGL4 314 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 OR8U1Q8NH10 309 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 TMEM171Q8WVE6 324 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 ARV1Q9H2C2 271 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 UNKLQ9H9P5 680 aaKnown RBP12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 MBNL3Q9NUK0 354 aaKnown RBP12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 KCNS2Q9ULS6 477 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 SLC25A15Q9Y619 301 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 TMEM210A6NLX4 147 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 C1QTNF9BB2RNN3 333 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 SH2D1BO14796 132 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 HSPA12AO43301 675 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 ARG1P05089 322 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 VDAC1P21796 283 aa12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 MDH2P40926 338 aaKnown RBP12.76□□□□□ -0.37
SCAMP4-202ENST00000409472 TNFRSF9Q07011 255 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms