RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 SDHAF2Q9NX18 166 aa11.58□□□□□ -0.56
GPNMB-203ENST00000409458 HSPB11Q9Y547 144 aa11.58□□□□□ -0.56
GPNMB-203ENST00000409458 FXYD6-FXYD2A0A087WZ82 144 aa11.57□□□□□ -0.56
GPNMB-203ENST00000409458 A0A1W2PPE3 182 aa11.57□□□□□ -0.56
GPNMB-203ENST00000409458 CDS2O95674 445 aa11.57□□□□□ -0.56
GPNMB-203ENST00000409458 IFNA21P01568 189 aa11.57□□□□□ -0.56
GPNMB-203ENST00000409458 ZNF16P17020 682 aaPredicted RBP11.57□□□□□ -0.56
GPNMB-203ENST00000409458 EFNA4P52798 201 aa11.57□□□□□ -0.56
GPNMB-203ENST00000409458 TMEM30BQ3MIR4 351 aa11.57□□□□□ -0.56
GPNMB-203ENST00000409458 ZNF695Q8IW36 515 aa11.57□□□□□ -0.56
GPNMB-203ENST00000409458 FAM216AQ8WUB2 273 aa11.57□□□□□ -0.56
GPNMB-203ENST00000409458 ABHD14AQ9BUJ0 271 aa11.57□□□□□ -0.56
GPNMB-203ENST00000409458 LIN7CQ9NUP9 197 aaKnown RBP11.57□□□□□ -0.56
GPNMB-203ENST00000409458 COMMD9Q9P000 198 aa11.57□□□□□ -0.56
GPNMB-203ENST00000409458 RPUSD1Q9UJJ7 312 aaKnown RBP11.57□□□□□ -0.56
GPNMB-203ENST00000409458 YLPM1P49750 1951 aaKnown RBP11.57□□□□□ -0.56
GPNMB-203ENST00000409458 MYO18BQ8IUG5 2567 aa11.56□□□□□ -0.56
GPNMB-203ENST00000409458 HAX1O00165 279 aa11.56□□□□□ -0.56
GPNMB-203ENST00000409458 ITGB1BP1O14713 200 aa11.56□□□□□ -0.56
GPNMB-203ENST00000409458 B3GALNT1O75752 331 aa11.56□□□□□ -0.56
GPNMB-203ENST00000409458 GPR12P47775 334 aa11.56□□□□□ -0.56
GPNMB-203ENST00000409458 DLX6P56179 175 aa11.56□□□□□ -0.56
GPNMB-203ENST00000409458 RPL30P62888 115 aaKnown RBP11.56□□□□□ -0.56
GPNMB-203ENST00000409458 FGL1Q08830 312 aa11.56□□□□□ -0.56
GPNMB-203ENST00000409458 IL15RAQ13261 267 aa11.56□□□□□ -0.56
GPNMB-203ENST00000409458 IAH1Q2TAA2 248 aaPredicted RBP11.56□□□□□ -0.56
GPNMB-203ENST00000409458 LGALSLQ3ZCW2 172 aaPredicted RBP11.56□□□□□ -0.56
GPNMB-203ENST00000409458 ZNF439Q8NDP4 499 aa11.56□□□□□ -0.56
GPNMB-203ENST00000409458 OR8B3Q8NGG8 313 aa11.56□□□□□ -0.56
GPNMB-203ENST00000409458 OR52M1Q8NGK5 317 aa11.56□□□□□ -0.56
GPNMB-203ENST00000409458 NEIL1Q96FI4 390 aaPredicted RBP11.56□□□□□ -0.56
GPNMB-203ENST00000409458 OR8B2Q96RD0 313 aa11.56□□□□□ -0.56
GPNMB-203ENST00000409458 MIOXQ9UGB7 285 aa11.56□□□□□ -0.56
GPNMB-203ENST00000409458 TRBV23-1A0A0A0MS06 115 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 RNF212BA8MTL3 300 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 MPC2O95563 127 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 GNG10P50151 68 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 TMEM33P57088 247 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 CYCSP99999 105 aaKnown RBP11.55□□□□□ -0.56
GPNMB-203ENST00000409458 CT45A1Q5HYN5 189 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 C11orf87Q6NUJ2 197 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 HEPN1Q6WQI6 88 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 OR10A7Q8NGE5 316 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 CT45A3Q8NHU0 189 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 RBPMSQ93062 196 aaKnown RBP11.55□□□□□ -0.56
GPNMB-203ENST00000409458 IL22RA2Q969J5 263 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 CCL19Q99731 98 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 NARFLQ9H6Q4 476 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 GSKIPQ9P0R6 139 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 TMED3Q9Y3Q3 217 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 USF3Q68DE3 2245 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 ARPC5O15511 151 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 IGKV1-39P01597 117 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 IGKV1D-39P04432 117 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 SERPINE2P07093 398 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 CXCL2P19875 107 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 PSMB6P28072 239 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 SSTR2P30874 369 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 GPR6P46095 362 aaPredicted RBP11.55□□□□□ -0.56
GPNMB-203ENST00000409458 RAB7AP51149 207 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 IFITM2Q01629 132 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 ZNF585BQ52M93 769 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 RPL39P5Q59GN2 51 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 WDR25Q64LD2 544 aaPredicted RBP11.55□□□□□ -0.56
GPNMB-203ENST00000409458 ZBTB8BQ8NAP8 495 aaPredicted RBP11.55□□□□□ -0.56
GPNMB-203ENST00000409458 MBD2Q9UBB5 411 aa11.55□□□□□ -0.56
GPNMB-203ENST00000409458 DUXBA0A1W2PPF3 345 aa11.54□□□□□ -0.56
GPNMB-203ENST00000409458 LINC00473A8K010 186 aa11.54□□□□□ -0.56
GPNMB-203ENST00000409458 HMSDA8MTL9 139 aa11.54□□□□□ -0.56
GPNMB-203ENST00000409458 F5H0A9 414 aaPredicted RBP11.54□□□□□ -0.56
GPNMB-203ENST00000409458 PROP1O75360 226 aa11.54□□□□□ -0.56
GPNMB-203ENST00000409458 IGHV4-39P01824 125 aa11.54□□□□□ -0.56
GPNMB-203ENST00000409458 SLC25A4P12235 298 aa11.54□□□□□ -0.56
GPNMB-203ENST00000409458 COX6B1P14854 86 aa11.54□□□□□ -0.56
GPNMB-203ENST00000409458 LINC00205P59089 165 aa11.54□□□□□ -0.56
GPNMB-203ENST00000409458 CATR1Q13166 79 aa11.54□□□□□ -0.56
GPNMB-203ENST00000409458 RAB32Q13637 225 aa11.54□□□□□ -0.56
GPNMB-203ENST00000409458 OR2B11Q5JQS5 317 aa11.54□□□□□ -0.56
GPNMB-203ENST00000409458 C1orf229Q6ZS94 237 aaPredicted RBP11.54□□□□□ -0.56
GPNMB-203ENST00000409458 ODF3L1Q8IXM7 274 aa11.54□□□□□ -0.56
GPNMB-203ENST00000409458 ZNF525Q8N782 197 aa11.54□□□□□ -0.56
GPNMB-203ENST00000409458 TCTEX1D2Q8WW35 142 aa11.54□□□□□ -0.56
GPNMB-203ENST00000409458 PATZ1Q9HBE1 687 aaKnown RBP11.54□□□□□ -0.56
GPNMB-203ENST00000409458 ZNRD1Q9P1U0 126 aa11.54□□□□□ -0.56
GPNMB-203ENST00000409458 SAA2-SAA4A0A096LPE2 208 aa11.53□□□□□ -0.56
GPNMB-203ENST00000409458 CLEC18AA5D8T8 446 aa11.53□□□□□ -0.56
GPNMB-203ENST00000409458 H0YIZ8 118 aa11.53□□□□□ -0.56
GPNMB-203ENST00000409458 RAMP3O60896 148 aa11.53□□□□□ -0.56
GPNMB-203ENST00000409458 SAA2P0DJI9 122 aaPredicted RBP11.53□□□□□ -0.56
GPNMB-203ENST00000409458 BRWD1-AS2P59051 145 aa11.53□□□□□ -0.56
GPNMB-203ENST00000409458 S100A10P60903 97 aa11.53□□□□□ -0.56
GPNMB-203ENST00000409458 NMSQ5H8A3 153 aa11.53□□□□□ -0.56
GPNMB-203ENST00000409458 ZNF66Q6ZN08 573 aa11.53□□□□□ -0.56
GPNMB-203ENST00000409458 CLEC18CQ8NCF0 446 aa11.53□□□□□ -0.56
GPNMB-203ENST00000409458 HSD17B10Q99714 261 aaKnown RBP11.53□□□□□ -0.56
GPNMB-203ENST00000409458 DOCK11Q5JSL3 2073 aa11.52□□□□□ -0.56
GPNMB-203ENST00000409458 A0A0G2JRQ6 117 aa11.52□□□□□ -0.56
GPNMB-203ENST00000409458 C17orf98A8MV24 154 aa11.52□□□□□ -0.56
GPNMB-203ENST00000409458 C22orf46C9J442 243 aa11.52□□□□□ -0.56
GPNMB-203ENST00000409458 M0R1X1 148 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms