RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 KIAA2026Q5HYC2 2103 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 SDK2Q58EX2 2172 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 ZNF816-ZNF321PA0A0X1KG74 233 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 hCG_38984A0A1B0GV85 526 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 LCN2P80188 198 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 IZUMO4Q1ZYL8 232 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 BTNL3Q6UXE8 466 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 PIP4P1Q86T03 277 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 FADS6Q8N9I5 356 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 OR4F5Q8NH21 305 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 NEK7Q8TDX7 302 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 OR4F4Q96R69 305 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 UCN2Q96RP3 112 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 PARD6GQ9BYG4 376 aaPredicted RBP13.14□□□□□ -0.31
LIMS2-205ENST00000409455 CELSR3Q9NYQ7 3312 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 CNTRLQ7Z7A1 2325 aa13.14□□□□□ -0.31
LIMS2-205ENST00000409455 UBE2L5PA0A1B0GUS4 154 aa13.13□□□□□ -0.31
LIMS2-205ENST00000409455 CD300LBA8K4G0 201 aa13.13□□□□□ -0.31
LIMS2-205ENST00000409455 ZNF705FA8MVS1 300 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-205ENST00000409455 GYPAP02724 150 aa13.13□□□□□ -0.31
LIMS2-205ENST00000409455 ZNF705DP0CH99 300 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-205ENST00000409455 ZNF705BP0CI00 300 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-205ENST00000409455 PSG2P11465 335 aa13.13□□□□□ -0.31
LIMS2-205ENST00000409455 Q0VFX4 171 aa13.13□□□□□ -0.31
LIMS2-205ENST00000409455 TAF15Q92804 592 aaKnown RBP eCLIP13.13□□□□□ -0.31
LIMS2-205ENST00000409455 MS4A10Q96PG2 267 aa13.13□□□□□ -0.31
LIMS2-205ENST00000409455 HSPB6O14558 160 aa13.13□□□□□ -0.31
LIMS2-205ENST00000409455 TP53I11O14683 189 aa13.13□□□□□ -0.31
LIMS2-205ENST00000409455 CLDN15P56746 228 aa13.13□□□□□ -0.31
LIMS2-205ENST00000409455 ZNF92Q03936 586 aa13.13□□□□□ -0.31
LIMS2-205ENST00000409455 PRDX4Q13162 271 aa13.13□□□□□ -0.31
LIMS2-205ENST00000409455 PRSS8Q16651 343 aa13.13□□□□□ -0.31
LIMS2-205ENST00000409455 RPP25LQ8N5L8 163 aaKnown RBP13.13□□□□□ -0.31
LIMS2-205ENST00000409455 MANBALQ9NQG1 85 aa13.13□□□□□ -0.31
LIMS2-205ENST00000409455 ATP23Q9Y6H3 246 aa13.13□□□□□ -0.31
LIMS2-205ENST00000409455 TNFSF15O95150 251 aa13.12□□□□□ -0.31
LIMS2-205ENST00000409455 VENTXO95231 258 aa13.12□□□□□ -0.31
LIMS2-205ENST00000409455 SSR4P51571 173 aa13.12□□□□□ -0.31
LIMS2-205ENST00000409455 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.12□□□□□ -0.31
LIMS2-205ENST00000409455 HAPLN4Q86UW8 402 aa13.12□□□□□ -0.31
LIMS2-205ENST00000409455 DEFB124Q8NES8 71 aa13.12□□□□□ -0.31
LIMS2-205ENST00000409455 BTF3L4Q96K17 158 aa13.12□□□□□ -0.31
LIMS2-205ENST00000409455 OR4C12Q96R67 309 aa13.12□□□□□ -0.31
LIMS2-205ENST00000409455 HPRT1P00492 218 aa13.12□□□□□ -0.31
LIMS2-205ENST00000409455 LINC00614P0C842 121 aa13.12□□□□□ -0.31
LIMS2-205ENST00000409455 MLF1P58340 268 aa13.12□□□□□ -0.31
LIMS2-205ENST00000409455 C21orf62-AS1Q17RA5 79 aa13.12□□□□□ -0.31
LIMS2-205ENST00000409455 ZNF468Q5VIY5 522 aaPredicted RBP13.12□□□□□ -0.31
LIMS2-205ENST00000409455 Q6ZRM9 215 aa13.12□□□□□ -0.31
LIMS2-205ENST00000409455 IMMP2LQ96T52 175 aa13.12□□□□□ -0.31
LIMS2-205ENST00000409455 SLC25A22Q9H936 323 aa13.12□□□□□ -0.31
LIMS2-205ENST00000409455 TRAPPC1Q9Y5R8 145 aa13.12□□□□□ -0.31
LIMS2-205ENST00000409455 IGKV1-6A0A0C4DH72 117 aa13.11□□□□□ -0.31
LIMS2-205ENST00000409455 OR6C6A6NF89 314 aa13.11□□□□□ -0.31
LIMS2-205ENST00000409455 IFNL4K9M1U5 179 aa13.11□□□□□ -0.31
LIMS2-205ENST00000409455 HMGB3O15347 200 aaKnown RBP13.11□□□□□ -0.31
LIMS2-205ENST00000409455 NPSP0C0P6 89 aa13.11□□□□□ -0.31
LIMS2-205ENST00000409455 CCL3P10147 92 aa13.11□□□□□ -0.31
LIMS2-205ENST00000409455 ZNF32P17041 273 aa13.11□□□□□ -0.31
LIMS2-205ENST00000409455 BCL3P20749 454 aa13.11□□□□□ -0.31
LIMS2-205ENST00000409455 SPANXN5Q5MJ07 72 aa13.11□□□□□ -0.31
LIMS2-205ENST00000409455 PRSS33Q8NF86 280 aa13.11□□□□□ -0.31
LIMS2-205ENST00000409455 ZCCHC14Q8WYQ9 949 aaKnown RBP13.11□□□□□ -0.31
LIMS2-205ENST00000409455 LSM10Q969L4 123 aaKnown RBP13.11□□□□□ -0.31
LIMS2-205ENST00000409455 TBX15Q96SF7 602 aa13.11□□□□□ -0.31
LIMS2-205ENST00000409455 REPIN1Q9BWE0 567 aaKnown RBP13.11□□□□□ -0.31
LIMS2-205ENST00000409455 TIMM9Q9Y5J7 89 aa13.11□□□□□ -0.31
LIMS2-205ENST00000409455 CTXND1A0A1B0GTU2 59 aa13.11□□□□□ -0.31
LIMS2-205ENST00000409455 A6NNC1 897 aa13.11□□□□□ -0.31
LIMS2-205ENST00000409455 IGKV1D-33P01593 117 aa13.11□□□□□ -0.31
LIMS2-205ENST00000409455 IGKV1-33P01594 117 aa13.11□□□□□ -0.31
LIMS2-205ENST00000409455 IL3RAP26951 378 aa13.11□□□□□ -0.31
LIMS2-205ENST00000409455 RAET1LQ5VY80 246 aa13.11□□□□□ -0.31
LIMS2-205ENST00000409455 WNT5AP41221 380 aa13.1□□□□□ -0.31
LIMS2-205ENST00000409455 PPP1CBP62140 327 aa13.1□□□□□ -0.31
LIMS2-205ENST00000409455 SLC38A11Q08AI6 406 aa13.1□□□□□ -0.31
LIMS2-205ENST00000409455 FAM78BQ5VT40 261 aa13.1□□□□□ -0.31
LIMS2-205ENST00000409455 OR5T1Q8NG75 326 aa13.1□□□□□ -0.31
LIMS2-205ENST00000409455 SDSLQ96GA7 329 aa13.1□□□□□ -0.31
LIMS2-205ENST00000409455 PROK2Q9HC23 129 aa13.1□□□□□ -0.31
LIMS2-205ENST00000409455 OR2W1Q9Y3N9 320 aa13.1□□□□□ -0.31
LIMS2-205ENST00000409455 SPAARA0A1B0GVQ0 90 aa13.1□□□□□ -0.31
LIMS2-205ENST00000409455 G3V3Y1 287 aa13.1□□□□□ -0.31
LIMS2-205ENST00000409455 PATE4P0C8F1 98 aa13.1□□□□□ -0.31
LIMS2-205ENST00000409455 B4GALT1P15291 398 aa13.1□□□□□ -0.31
LIMS2-205ENST00000409455 CHRNA7P36544 502 aa13.1□□□□□ -0.31
LIMS2-205ENST00000409455 CST9LP1Q5W188 147 aa13.1□□□□□ -0.31
LIMS2-205ENST00000409455 TMEM256Q8N2U0 113 aa13.1□□□□□ -0.31
LIMS2-205ENST00000409455 Q8NFD4 153 aa13.1□□□□□ -0.31
LIMS2-205ENST00000409455 OR10J5Q8NHC4 309 aa13.1□□□□□ -0.31
LIMS2-205ENST00000409455 NEIL1Q96FI4 390 aaPredicted RBP13.1□□□□□ -0.31
LIMS2-205ENST00000409455 DMXL1Q9Y485 3027 aa13.1□□□□□ -0.31
LIMS2-205ENST00000409455 EML6Q6ZMW3 1958 aa13.09□□□□□ -0.31
LIMS2-205ENST00000409455 A0A0U1RQK1 487 aa13.09□□□□□ -0.31
LIMS2-205ENST00000409455 ZNF320A2RRD8 509 aa13.09□□□□□ -0.31
LIMS2-205ENST00000409455 FGF12P61328 243 aa13.09□□□□□ -0.31
LIMS2-205ENST00000409455 TOMM20LQ6UXN7 152 aa13.09□□□□□ -0.31
LIMS2-205ENST00000409455 ZIC4Q8N9L1 334 aa13.09□□□□□ -0.31
LIMS2-205ENST00000409455 OR10V1Q8NGI7 309 aa13.09□□□□□ -0.31
LIMS2-205ENST00000409455 OR1K1Q8NGR3 316 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms