RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 FAM206AQ9NX38 181 aa21.57■■□□□ 1.04
SPIRE1-202ENST00000409402 XIRP1Q702N8 1843 aaKnown RBP21.56■■□□□ 1.04
SPIRE1-202ENST00000409402 TMEM45BQ96B21 275 aa21.56■■□□□ 1.04
SPIRE1-202ENST00000409402 SRD5A3Q9H8P0 318 aa21.56■■□□□ 1.04
SPIRE1-202ENST00000409402 PCM1Q15154 2024 aa21.56■■□□□ 1.04
SPIRE1-202ENST00000409402 NUP214P35658 2090 aaPredicted RBP21.56■■□□□ 1.04
SPIRE1-202ENST00000409402 CTXND1A0A1B0GTU2 59 aa21.56■■□□□ 1.04
SPIRE1-202ENST00000409402 GDF9O60383 454 aa21.56■■□□□ 1.04
SPIRE1-202ENST00000409402 KCNK7Q9Y2U2 307 aa21.56■■□□□ 1.04
SPIRE1-202ENST00000409402 PAGE4O60829 102 aa21.56■■□□□ 1.04
SPIRE1-202ENST00000409402 COX19Q49B96 90 aa21.56■■□□□ 1.04
SPIRE1-202ENST00000409402 TCL1AP56279 114 aa21.56■■□□□ 1.04
SPIRE1-202ENST00000409402 LY6EQ16553 131 aa21.56■■□□□ 1.04
SPIRE1-202ENST00000409402 SLC25A53Q5H9E4 307 aa21.56■■□□□ 1.04
SPIRE1-202ENST00000409402 CHCHD2Q9Y6H1 151 aaPredicted RBP21.56■■□□□ 1.04
SPIRE1-202ENST00000409402 SCN10AQ9Y5Y9 1956 aa21.56■■□□□ 1.04
SPIRE1-202ENST00000409402 IGKV1D-42A0A075B6H8 117 aa21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 SMAD7O15105 426 aaKnown RBP21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 SCO1O75880 301 aa21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 CD40P25942 277 aa21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 G0S2P27469 103 aa21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 OR9G1Q8NH87 305 aa21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 TMEM30BQ3MIR4 351 aa21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 VWCEQ96DN2 955 aa21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 RALYQ9UKM9 306 aaKnown RBP21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 AUP1Q9Y679 476 aa21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 RFPL3SP0C7P2 107 aa21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 APCDD1LQ8NCL9 501 aa21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 A1L4Q6 167 aa21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 FAM57AQ8TBR7 257 aa21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 C16orf92Q96LL3 132 aa21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 OPN4Q9UHM6 478 aa21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 KIF13BQ9NQT8 1826 aa21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 C10orf128Q5T292 105 aa21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 STPG3Q8N7X2 389 aa21.55■■□□□ 1.04
SPIRE1-202ENST00000409402 SS18L1O75177 396 aaPredicted RBP21.54■■□□□ 1.04
SPIRE1-202ENST00000409402 OR10J6PQ8NGY7 276 aa21.54■■□□□ 1.04
SPIRE1-202ENST00000409402 DCAF12L2Q5VW00 463 aa21.54■■□□□ 1.04
SPIRE1-202ENST00000409402 TOMM20LQ6UXN7 152 aa21.54■■□□□ 1.04
SPIRE1-202ENST00000409402 CLEC7AQ9BXN2 247 aa21.54■■□□□ 1.04
SPIRE1-202ENST00000409402 PITX3O75364 302 aa21.54■■□□□ 1.04
SPIRE1-202ENST00000409402 PRSS1P07477 247 aa21.54■■□□□ 1.04
SPIRE1-202ENST00000409402 LAMTOR1Q6IAA8 161 aa21.54■■□□□ 1.04
SPIRE1-202ENST00000409402 NEURL2Q9BR09 285 aa21.54■■□□□ 1.04
SPIRE1-202ENST00000409402 A0A1W2PP11 408 aa21.54■■□□□ 1.04
SPIRE1-202ENST00000409402 ZNF729A6NN14 1252 aaPredicted RBP21.54■■□□□ 1.04
SPIRE1-202ENST00000409402 ADAM11O75078 769 aa21.54■■□□□ 1.04
SPIRE1-202ENST00000409402 GCM2O75603 506 aaPredicted RBP21.54■■□□□ 1.04
SPIRE1-202ENST00000409402 CSN3P07498 182 aa21.54■■□□□ 1.04
SPIRE1-202ENST00000409402 ZNF735P0CB33 412 aa21.54■■□□□ 1.04
SPIRE1-202ENST00000409402 ERVS71-1P61550 626 aa21.54■■□□□ 1.04
SPIRE1-202ENST00000409402 HCP5Q6MZN7 132 aa21.54■■□□□ 1.04
SPIRE1-202ENST00000409402 WNT9BO14905 357 aa21.53■■□□□ 1.04
SPIRE1-202ENST00000409402 ACSF3Q4G176 576 aaPredicted RBP21.53■■□□□ 1.04
SPIRE1-202ENST00000409402 JPT1Q9UK76 154 aa21.53■■□□□ 1.04
SPIRE1-202ENST00000409402 FAM106AQ4KMX7 169 aa21.53■■□□□ 1.04
SPIRE1-202ENST00000409402 TM4SF20Q53R12 229 aa21.53■■□□□ 1.04
SPIRE1-202ENST00000409402 OR2T10Q8NGZ9 312 aa21.53■■□□□ 1.04
SPIRE1-202ENST00000409402 PTGDSP41222 190 aa21.53■■□□□ 1.04
SPIRE1-202ENST00000409402 GBGT1Q8N5D6 347 aa21.53■■□□□ 1.04
SPIRE1-202ENST00000409402 PARD6AQ9NPB6 346 aa21.53■■□□□ 1.04
SPIRE1-202ENST00000409402 BMPR1BO00238 502 aa21.53■■□□□ 1.04
SPIRE1-202ENST00000409402 RHOVQ96L33 236 aa21.53■■□□□ 1.04
SPIRE1-202ENST00000409402 FAM74A3Q4VXF1 159 aa21.53■■□□□ 1.04
SPIRE1-202ENST00000409402 EAF1Q96JC9 268 aaPredicted RBP21.53■■□□□ 1.04
SPIRE1-202ENST00000409402 FAM24BQ8N5W8 94 aa21.52■■□□□ 1.04
SPIRE1-202ENST00000409402 WFDC6Q9BQY6 131 aa21.52■■□□□ 1.04
SPIRE1-202ENST00000409402 DCTN5Q9BTE1 182 aa21.52■■□□□ 1.04
SPIRE1-202ENST00000409402 OR10C1Q96KK4 312 aa21.52■■□□□ 1.04
SPIRE1-202ENST00000409402 CELA3AP09093 270 aa21.52■■□□□ 1.04
SPIRE1-202ENST00000409402 TMEM78Q5T7P6 136 aa21.52■■□□□ 1.04
SPIRE1-202ENST00000409402 OR10J1P30954 320 aa21.52■■□□□ 1.04
SPIRE1-202ENST00000409402 SUCLG1P53597 346 aaKnown RBP21.52■■□□□ 1.04
SPIRE1-202ENST00000409402 FAM27E3Q08E93 113 aa21.52■■□□□ 1.04
SPIRE1-202ENST00000409402 SPANXN1Q5VSR9 72 aa21.52■■□□□ 1.04
SPIRE1-202ENST00000409402 DPPA3Q6W0C5 159 aa21.52■■□□□ 1.04
SPIRE1-202ENST00000409402 TOLLIPQ9H0E2 274 aa21.52■■□□□ 1.04
SPIRE1-202ENST00000409402 hCG_38984A0A1B0GV85 526 aa21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 NPIPB13A6NJU9 1138 aa21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 NPIPB4C9JG80 1138 aa21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 PGA5P0DJD9 388 aa21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 HNRNPA3P51991 378 aaKnown RBP21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 SELENOTP62341 195 aa21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 VWA1Q6PCB0 445 aa21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 TMEM186Q96B77 213 aa21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 SOSTQ9BQB4 213 aa21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 GLRXP35754 106 aa21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 RRN3P1Q2M238 152 aa21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 C1orf100Q5SVJ3 147 aa21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 SLC25A17O43808 307 aa21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 CXCL3P19876 107 aa21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 PRNTQ86SH4 94 aa21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 LMX1BO60663 402 aa21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 COMPP49747 757 aaPredicted RBP21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 MMP9P14780 707 aa21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 IQCJQ1A5X6 159 aa21.51■■□□□ 1.03
SPIRE1-202ENST00000409402 KIR2DL2P43627 348 aaPredicted RBP21.5■■□□□ 1.03
SPIRE1-202ENST00000409402 TNFSF10P50591 281 aa21.5■■□□□ 1.03
SPIRE1-202ENST00000409402 MFAP4P55083 255 aa21.5■■□□□ 1.03
SPIRE1-202ENST00000409402 TMEM222Q9H0R3 208 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms