RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 ERGP11308 486 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 SAXO1Q8IYX7 474 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 OR10AG1Q8NH19 301 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 SMIM8Q96KF7 97 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 WFIKKN1Q96NZ8 548 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 MS4A5Q9H3V2 200 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 C5orf66Q9H5L9 145 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 IGLV1-36A0A0B4J1U3 117 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 PGLYRP1O75594 196 aaPredicted RBP11.23□□□□□ -0.61
RNF43-201ENST00000407977 EML2O95834 649 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 CD3EP07766 207 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 MAS1LP35410 378 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 CXorf66Q5JRM2 361 aaPredicted RBP11.23□□□□□ -0.61
RNF43-201ENST00000407977 SELENOHQ8IZQ5 122 aaKnown RBP11.23□□□□□ -0.61
RNF43-201ENST00000407977 SFRP2Q96HF1 295 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 RBKSQ9H477 322 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 SLX4Q8IY92 1834 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 CKS2P33552 79 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 TAS2R60P59551 318 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 EIF4EBP2Q13542 120 aaPredicted RBP11.23□□□□□ -0.61
RNF43-201ENST00000407977 TMEM92Q6UXU6 159 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 GUCD1Q96NT3 240 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 CBLN4Q9NTU7 201 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 PEF1Q9UBV8 284 aaKnown RBP11.23□□□□□ -0.61
RNF43-201ENST00000407977 TCFL5Q9UL49 500 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 DOCK2Q92608 1830 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 K7N7A8 449 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 PIN1P1O15428 100 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 CA7P43166 264 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 COPS9Q8WXC6 57 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 UCN2Q96RP3 112 aa11.23□□□□□ -0.61
RNF43-201ENST00000407977 CENPVL1A0A0U1RR11 272 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 C21orf140B9A014 251 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 CLDN14O95500 239 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 SOD3P08294 240 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 ZNF841Q6ZN19 808 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 KCNK17Q96T54 332 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 PLA2G2FQ9BZM2 168 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 SMCHD1A6NHR9 2005 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 LOC107984156A0A0G2JMH3 177 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 CELA2BP08218 269 aaPredicted RBP11.22□□□□□ -0.61
RNF43-201ENST00000407977 LINC00869P0C866 280 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 HOXB1P14653 301 aaPredicted RBP11.22□□□□□ -0.61
RNF43-201ENST00000407977 ARL17AQ8IVW1 177 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 ZNF502Q8TBZ5 544 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 GPR146Q96CH1 333 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 HSPB7Q9UBY9 170 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 NHSQ6T4R5 1651 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 DLL1O00548 723 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 FOXS1O43638 330 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 PRDX2P32119 198 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 ID1P41134 155 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 ABCA3Q99758 1704 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 PKIBQ9C010 78 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 MAP1LC3AQ9H492 121 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 TRPM3Q9HCF6 1732 aaPredicted RBP11.22□□□□□ -0.61
RNF43-201ENST00000407977 ASCC3Q8N3C0 2202 aaKnown RBP11.22□□□□□ -0.61
RNF43-201ENST00000407977 F2RL2O00254 374 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 UQCRFS1P47985 274 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 LAIR2Q6ISS4 152 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 FGFRL1Q8N441 504 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 WDR31Q8NA23 367 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 RARRES2Q99969 163 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 IL36RNQ9UBH0 155 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 A0A1B0GV90 55 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 ZNF729A6NN14 1252 aaPredicted RBP11.22□□□□□ -0.61
RNF43-201ENST00000407977 FAM157AC9JC47 383 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 IGKV1D-16P01601 117 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 C8orf88P0DMB2 117 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 SRIP30626 198 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 MIEN1Q9BRT3 115 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 PARLQ9H300 379 aa11.22□□□□□ -0.61
RNF43-201ENST00000407977 ZNF430Q9H8G1 570 aaPredicted RBP11.22□□□□□ -0.61
RNF43-201ENST00000407977 ZFC3H1O60293 1989 aaKnown RBP11.22□□□□□ -0.61
RNF43-201ENST00000407977 SIGLEC5O15389 551 aa11.21□□□□□ -0.61
RNF43-201ENST00000407977 CCL3P10147 92 aa11.21□□□□□ -0.61
RNF43-201ENST00000407977 RPL27AP46776 148 aaKnown RBP11.21□□□□□ -0.61
RNF43-201ENST00000407977 SIGLEC14Q08ET2 396 aa11.21□□□□□ -0.61
RNF43-201ENST00000407977 C2orf68Q2NKX9 166 aa11.21□□□□□ -0.61
RNF43-201ENST00000407977 TMEM136Q6ZRR5 245 aa11.21□□□□□ -0.61
RNF43-201ENST00000407977 OR2I1PQ8NGU4 316 aa11.21□□□□□ -0.61
RNF43-201ENST00000407977 CHRNA10Q9GZZ6 450 aa11.21□□□□□ -0.61
RNF43-201ENST00000407977 TUBA4BQ9H853 241 aa11.21□□□□□ -0.61
RNF43-201ENST00000407977 LOC389332A0A1B0GUA5 103 aa11.21□□□□□ -0.61
RNF43-201ENST00000407977 A0A1B0GV72 72 aa11.21□□□□□ -0.61
RNF43-201ENST00000407977 MNX1P50219 401 aaPredicted RBP11.21□□□□□ -0.61
RNF43-201ENST00000407977 SLC35B1P78383 322 aa11.21□□□□□ -0.61
RNF43-201ENST00000407977 ADIPOQQ15848 244 aa11.21□□□□□ -0.61
RNF43-201ENST00000407977 TTC32Q5I0X7 151 aa11.21□□□□□ -0.61
RNF43-201ENST00000407977 DNLZQ5SXM8 178 aa11.21□□□□□ -0.61
RNF43-201ENST00000407977 SLC25A47Q6Q0C1 308 aa11.21□□□□□ -0.61
RNF43-201ENST00000407977 TCF24Q7RTU0 167 aa11.21□□□□□ -0.61
RNF43-201ENST00000407977 TMUB1Q9BVT8 246 aa11.21□□□□□ -0.61
RNF43-201ENST00000407977 A0A087WWC5 75 aa11.21□□□□□ -0.62
RNF43-201ENST00000407977 TMSB15BA0A087X1C1 80 aa11.21□□□□□ -0.62
RNF43-201ENST00000407977 ERVFRD-1P60508 538 aa11.21□□□□□ -0.62
RNF43-201ENST00000407977 TNFRSF9Q07011 255 aa11.21□□□□□ -0.62
RNF43-201ENST00000407977 JOSD1Q15040 202 aaPredicted RBP11.21□□□□□ -0.62
RNF43-201ENST00000407977 ZNF362Q5T0B9 420 aaPredicted RBP11.21□□□□□ -0.62
RNF43-201ENST00000407977 SPINK14Q6IE38 97 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms