RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 KIR2DS3K7RE56 304 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 CYR61O00622 381 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 PPIHO43447 177 aaKnown RBP5.08□□□□□ -1.6
HDAC9-203ENST00000406072 LEPROTL1O95214 131 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 HOXC12P31275 282 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 CKS1BP61024 79 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 SELENOTP62341 195 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 KIR2DS5Q14953 304 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 SMIM21Q3B7S5 101 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 CBLN3Q6UW01 205 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 FLVCR1-AS1Q8TAF5 88 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 CPT1CQ8TCG5 803 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 APOBEC4Q8WW27 367 aaKnown RBP5.08□□□□□ -1.6
HDAC9-203ENST00000406072 A0A1W2PPV9 198 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 CRYM-AS1A6NIL9 109 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 LMX1BO60663 402 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 GCSHP23434 173 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 NPY1RP25929 384 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 CSN1S1P47710 185 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 NMUP48645 174 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 UCP2P55851 309 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 DCAF7P61962 342 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 RELBQ01201 579 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 SPINK9Q5DT21 86 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 C1orf100Q5SVJ3 147 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 C9orf135Q5VTT2 229 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 NT5CQ8TCD5 201 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 TNFRSF14Q92956 283 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 RCC1LQ96I51 464 aaKnown RBP5.08□□□□□ -1.6
HDAC9-203ENST00000406072 OR8B2Q96RD0 313 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 COL25A1Q9BXS0 654 aaPredicted RBP5.08□□□□□ -1.6
HDAC9-203ENST00000406072 FOXQ1Q9C009 403 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 C19orf25Q9UFG5 118 aaPredicted RBP5.08□□□□□ -1.6
HDAC9-203ENST00000406072 SPCS1Q9Y6A9 102 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 COX11Q9Y6N1 276 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 A0A087WV48 116 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 TRBV6-7A0A0A0MS04 114 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 TRAV39A0A0B4J263 110 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 BLACEA4D250 179 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 LILRA5A6NI73 299 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 DEGS1O15121 323 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 SRSF10O75494 262 aaKnown RBP5.08□□□□□ -1.6
HDAC9-203ENST00000406072 STAG3L3P0CL85 134 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 IGFBP4P22692 258 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 RPL23P62829 140 aaKnown RBP5.08□□□□□ -1.6
HDAC9-203ENST00000406072 LHFPL2Q6ZUX7 228 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.08□□□□□ -1.6
HDAC9-203ENST00000406072 CALHM1Q8IU99 346 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 OR5AS1Q8N127 324 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 OR8A1Q8NGG7 326 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 NAT6Q93015 286 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 BOD1Q96IK1 185 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 OR6C1Q96RD1 312 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 CCL28Q9NRJ3 127 aa5.08□□□□□ -1.6
HDAC9-203ENST00000406072 HEATR1Q9H583 2144 aaKnown RBP5.07□□□□□ -1.6
HDAC9-203ENST00000406072 IGSF23A1L1A6 192 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 K7N7A8 449 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 KLF4O43474 513 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 PDCD6O75340 191 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 HLA-DQA1P01909 254 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 ZNF735P0CB33 412 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 ZNF883P0CG24 379 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 IL3RAP26951 378 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 C17orf67Q0P5P2 114 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 ZIC1Q15915 447 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 MRPL52Q86TS9 123 aaKnown RBP5.07□□□□□ -1.6
HDAC9-203ENST00000406072 VASH2Q86V25 355 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 DEFB119Q8N690 84 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 NHLRC2Q8NBF2 726 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 OR8G5Q8NG78 346 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 RNASEH2CQ8TDP1 164 aaKnown RBP5.07□□□□□ -1.6
HDAC9-203ENST00000406072 GPHA2Q96T91 129 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 GFI1Q99684 422 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 QTRT1Q9BXR0 403 aaKnown RBP5.07□□□□□ -1.6
HDAC9-203ENST00000406072 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.07□□□□□ -1.6
HDAC9-203ENST00000406072 MPDZO75970 2070 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 A0A1W2PNR3 127 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 H3BVH4 76 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 APOBEC1P41238 236 aaKnown RBP5.07□□□□□ -1.6
HDAC9-203ENST00000406072 PRSS12P56730 875 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 NXPH1P58417 271 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 EIF3IQ13347 325 aaKnown RBP5.07□□□□□ -1.6
HDAC9-203ENST00000406072 TMEM97Q5BJF2 176 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 TTC32Q5I0X7 151 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 SAP30LQ9HAJ7 183 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 SLC7A10Q9NS82 523 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 TMEM242Q9NWH2 141 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 AHCTF1Q8WYP5 2266 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 ODAMA1E959 279 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 OR4C46A6NHA9 309 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 CORTO00230 105 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 CA1P00915 261 aaPredicted RBP5.07□□□□□ -1.6
HDAC9-203ENST00000406072 STAG3L2P0CL84 134 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 FSTP19883 344 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 RHOBP62745 196 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 ARL16Q0P5N6 197 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 MMD2Q8IY49 270 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 SLC22A18ASQ8N1D0 253 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 LINC01555Q8NAE3 123 aa5.07□□□□□ -1.6
HDAC9-203ENST00000406072 OR2K2Q8NGT1 345 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms