RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 CR1LQ2VPA4 569 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 Q3ZCU0 254 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 OR2B11Q5JQS5 317 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 DCAF12L2Q5VW00 463 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 DRAM1Q8N682 238 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 EDARADDQ8WWZ3 215 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 WDR89Q96FK6 387 aaPredicted RBP3.05□□□□□ -1.92
RTN4-208ENST00000404909 ZNF486Q96H40 463 aaPredicted RBP3.05□□□□□ -1.92
RTN4-208ENST00000404909 SEC22AQ96IW7 307 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 TP53RKQ96S44 253 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 SSBP3Q9BWW4 388 aaPredicted RBP3.05□□□□□ -1.92
RTN4-208ENST00000404909 ZNF436Q9C0F3 470 aaPredicted RBP3.05□□□□□ -1.92
RTN4-208ENST00000404909 NCOR1P1Q9H4R4 102 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 PATZ1Q9HBE1 687 aaKnown RBP3.05□□□□□ -1.92
RTN4-208ENST00000404909 LPAR2Q9HBW0 351 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 GFOD1Q9NXC2 390 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 ZNRD1Q9P1U0 126 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 ONECUT1Q9UBC0 465 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 TRBV23-1A0A0A0MS06 115 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 C22orf46C9J442 243 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 YPEL1O60688 119 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 IGLV2-14P01704 120 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 H2BFSP57053 126 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 LCN2P80188 198 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 ZFP69Q49AA0 526 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 RPL39P5Q59GN2 51 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 CLEC2AQ6UVW9 174 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 HEPN1Q6WQI6 88 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 LYG1Q8N1E2 194 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 ZNF645Q8N7E2 425 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 BVESQ8NE79 360 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 OR2T35Q8NGX2 323 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 CORO2AQ92828 525 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 YPEL2Q96QA6 119 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 AGMATQ9BSE5 352 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 ABHD14AQ9BUJ0 271 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 SUCNR1Q9BXA5 334 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 TAS2R3Q9NYW6 316 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 LPAR3Q9UBY5 353 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 RPUSD1Q9UJJ7 312 aaKnown RBP3.05□□□□□ -1.92
RTN4-208ENST00000404909 CELSR1Q9NYQ6 3014 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 LOC105371242A0A075B767 164 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 FSTL3O95633 263 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 SERPINE2P07093 398 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 ARF6P62330 175 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 LRRC37A5PQ49AS3 106 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 CT45A1Q5HYN5 189 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 FAM219AQ8IW50 185 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 CT45A3Q8NHU0 189 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 GLYATL2Q8WU03 294 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 IGFBPL1Q8WX77 278 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 PSMG3-AS1Q96PY0 264 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 PIMREGQ9BSJ6 248 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 SDHAF2Q9NX18 166 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 GSKIPQ9P0R6 139 aa3.05□□□□□ -1.92
RTN4-208ENST00000404909 MPTX1A8MV57 137 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 GPR37O15354 613 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 RPA2P15927 270 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 COX7A1P24310 79 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 F2RP25116 425 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 ZFP36P26651 326 aaKnown RBP3.04□□□□□ -1.92
RTN4-208ENST00000404909 SSTR2P30874 369 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 TMEM187Q14656 261 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 TMEM268Q5VZI3 342 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 LYZL2Q7Z4W2 148 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 ZNF695Q8IW36 515 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 PDZD9Q8IXQ8 264 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 OR10X1Q8NGY0 326 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 CLDND2Q8NHS1 167 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 TCTEX1D2Q8WW35 142 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 GALNT14Q96FL9 552 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 C5orf30Q96GV9 206 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 AKR1E2Q96JD6 320 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 BARX1Q9HBU1 254 aaPredicted RBP3.04□□□□□ -1.92
RTN4-208ENST00000404909 SIRT7Q9NRC8 400 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 PRRC2AP48634 2157 aaKnown RBP3.04□□□□□ -1.92
RTN4-208ENST00000404909 IGHV4-30-2A0A087WSY4 118 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 A0A1W2PPH5 198 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 M0R1X1 148 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 IFNA21P01568 189 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 IGHV2-5P01817 119 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 LIPFP07098 398 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 IGHV1-8P0DP01 117 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 RAB7AP51149 207 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 Q5BKY6 102 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 LY6G6FQ5SQ64 297 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 LIAT1Q6ZQX7 453 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 LGI3Q8N145 548 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 ABHD12Q8N2K0 398 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 OR5M8Q8NGP6 311 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 RNASE11Q8TAA1 199 aaKnown RBP3.04□□□□□ -1.92
RTN4-208ENST00000404909 LHFPL5Q8TAF8 219 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 RAB39BQ96DA2 213 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 RBMXL1Q96E39 390 aaKnown RBP3.04□□□□□ -1.92
RTN4-208ENST00000404909 TMEM222Q9H0R3 208 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 IFI27L2Q9H2X8 130 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 ACANP16112 2415 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 ABCA1O95477 2261 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 SAA2-SAA4A0A096LPE2 208 aa3.04□□□□□ -1.92
RTN4-208ENST00000404909 IGHV4-61A0A0C4DH41 118 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms