RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 J3KRW8 73 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 SEMA7AO75326 666 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 ZNF596Q8TC21 504 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 SNX22Q96L94 193 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 NUDT16L1Q9BRJ7 211 aaKnown RBP15.65■□□□□ 0.1
COL18A1-204ENST00000400337 ZNF716A6NP11 495 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 MEOX2P50222 304 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 Q1RN00 199 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 CISD1Q9NZ45 108 aaKnown RBP15.65■□□□□ 0.1
COL18A1-204ENST00000400337 HILPDAQ9Y5L2 63 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 KCNMB2Q9Y691 235 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 HOXB1P14653 301 aaPredicted RBP15.65■□□□□ 0.1
COL18A1-204ENST00000400337 CCKARP32238 428 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 FDX2Q6P4F2 183 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 TCTEX1D1Q8N7M0 179 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 CHCHD2Q9Y6H1 151 aaPredicted RBP15.65■□□□□ 0.1
COL18A1-204ENST00000400337 TRAV34A0A0B4J273 112 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 DHRS7CA6NNS2 312 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 G0S2P27469 103 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 CXorf66Q5JRM2 361 aaPredicted RBP15.65■□□□□ 0.1
COL18A1-204ENST00000400337 MRPL54Q6P161 138 aaKnown RBP15.65■□□□□ 0.1
COL18A1-204ENST00000400337 GCSAMQ8N6F7 178 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 ZNF645Q8N7E2 425 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 SCN2AQ99250 2005 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 J3QR89 54 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 ZNF253O75346 499 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 PGLYRP1O75594 196 aaPredicted RBP15.65■□□□□ 0.1
COL18A1-204ENST00000400337 ERVFRD-1P60508 538 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 NAAAQ02083 359 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 KHDC3LQ587J8 217 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 Q96M66 194 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 TMEM204Q9BSN7 226 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 RSG1Q9BU20 258 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 HSF4Q9ULV5 492 aa15.65■□□□□ 0.1
COL18A1-204ENST00000400337 IGKV3D-11A0A0A0MRZ8 115 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 STXBP6Q8NFX7 210 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 WASHC3Q9Y3C0 194 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 CACNA1EQ15878 2313 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 RECKO95980 971 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 NPBWR2P48146 333 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 RHOVQ96L33 236 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 TIMP4Q99727 224 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 NPVFQ9HCQ7 196 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 NPIPB13A6NJU9 1138 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 NPIPB4C9JG80 1138 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 COX5BP10606 129 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 C10orf128Q5T292 105 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 TMEM54Q969K7 222 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 IGSF23A1L1A6 192 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 ORM1P02763 201 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 SNRPCP09234 159 aaKnown RBP15.64■□□□□ 0.09
COL18A1-204ENST00000400337 NAT2P11245 290 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 RPL29P47914 159 aaKnown RBP15.64■□□□□ 0.09
COL18A1-204ENST00000400337 TMPRSS3P57727 454 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 FAM74A3Q4VXF1 159 aa15.64■□□□□ 0.09
COL18A1-204ENST00000400337 NPDC1Q9NQX5 325 aaPredicted RBP15.64■□□□□ 0.09
COL18A1-204ENST00000400337 ODAMA1E959 279 aa15.63■□□□□ 0.09
COL18A1-204ENST00000400337 SOSTQ9BQB4 213 aa15.63■□□□□ 0.09
COL18A1-204ENST00000400337 LYRM2Q9NU23 88 aaPredicted RBP15.63■□□□□ 0.09
COL18A1-204ENST00000400337 SLC2A8Q9NY64 477 aa15.63■□□□□ 0.09
COL18A1-204ENST00000400337 ELOA3CA0A087WX78 387 aaPredicted RBP15.63■□□□□ 0.09
COL18A1-204ENST00000400337 DLL1O00548 723 aa15.63■□□□□ 0.09
COL18A1-204ENST00000400337 CYB5R3P00387 301 aaPredicted RBP15.63■□□□□ 0.09
COL18A1-204ENST00000400337 F12P00748 615 aaPredicted RBP15.63■□□□□ 0.09
COL18A1-204ENST00000400337 IGLV3-19P01714 112 aa15.63■□□□□ 0.09
COL18A1-204ENST00000400337 PGA5P0DJD9 388 aa15.63■□□□□ 0.09
COL18A1-204ENST00000400337 ZDHHC8Q9ULC8 765 aa15.63■□□□□ 0.09
COL18A1-204ENST00000400337 NPIPB9F8W1W9 429 aa15.63■□□□□ 0.09
COL18A1-204ENST00000400337 SERF2P84101 59 aa15.63■□□□□ 0.09
COL18A1-204ENST00000400337 FDCSPQ8NFU4 85 aa15.63■□□□□ 0.09
COL18A1-204ENST00000400337 SIGLEC12Q96PQ1 595 aa15.63■□□□□ 0.09
COL18A1-204ENST00000400337 BMPR1BO00238 502 aa15.62■□□□□ 0.09
COL18A1-204ENST00000400337 C1QL1O75973 258 aa15.62■□□□□ 0.09
COL18A1-204ENST00000400337 RPL27AP46776 148 aaKnown RBP15.62■□□□□ 0.09
COL18A1-204ENST00000400337 RSPO4Q2I0M5 234 aaPredicted RBP15.62■□□□□ 0.09
COL18A1-204ENST00000400337 CRIPAKQ8N1N5 446 aa15.62■□□□□ 0.09
COL18A1-204ENST00000400337 OR10C1Q96KK4 312 aa15.62■□□□□ 0.09
COL18A1-204ENST00000400337 C5orf66Q9H5L9 145 aa15.62■□□□□ 0.09
COL18A1-204ENST00000400337 H1FOOQ8IZA3 346 aaPredicted RBP15.62■□□□□ 0.09
COL18A1-204ENST00000400337 FGFRL1Q8N441 504 aa15.62■□□□□ 0.09
COL18A1-204ENST00000400337 CELA3AP09093 270 aa15.62■□□□□ 0.09
COL18A1-204ENST00000400337 DPPA3Q6W0C5 159 aa15.62■□□□□ 0.09
COL18A1-204ENST00000400337 LDLRAD3Q86YD5 345 aa15.62■□□□□ 0.09
COL18A1-204ENST00000400337 OR1L6Q8NGR2 347 aa15.62■□□□□ 0.09
COL18A1-204ENST00000400337 TMEM14DPA8MWL7 114 aa15.62■□□□□ 0.09
COL18A1-204ENST00000400337 TBX6O95947 436 aaPredicted RBP15.62■□□□□ 0.09
COL18A1-204ENST00000400337 GAPDHP04406 335 aaKnown RBP15.62■□□□□ 0.09
COL18A1-204ENST00000400337 FAM87AP0C7U9 286 aa15.62■□□□□ 0.09
COL18A1-204ENST00000400337 SULT1A2P50226 295 aa15.62■□□□□ 0.09
COL18A1-204ENST00000400337 SUCLG1P53597 346 aaKnown RBP15.62■□□□□ 0.09
COL18A1-204ENST00000400337 RPL30P62888 115 aaKnown RBP15.62■□□□□ 0.09
COL18A1-204ENST00000400337 FAM216AQ8WUB2 273 aa15.62■□□□□ 0.09
COL18A1-204ENST00000400337 FUT9Q9Y231 359 aa15.62■□□□□ 0.09
COL18A1-204ENST00000400337 SHISA3A0PJX4 238 aa15.61■□□□□ 0.09
COL18A1-204ENST00000400337 MMP9P14780 707 aa15.61■□□□□ 0.09
COL18A1-204ENST00000400337 SIRT7Q9NRC8 400 aa15.61■□□□□ 0.09
COL18A1-204ENST00000400337 CALYQ9NYX4 217 aa15.61■□□□□ 0.09
COL18A1-204ENST00000400337 PXMP4Q9Y6I8 212 aa15.61■□□□□ 0.09
COL18A1-204ENST00000400337 M0R2Z0 102 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms