RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 CELA2BP08218 269 aaPredicted RBP8.02□□□□□ -1.13
COL28A1-201ENST00000399429 G6PCP35575 357 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 FOXL2P58012 376 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 NHLH1Q02575 133 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 TPTE2P1Q5T6R2 138 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 SLC25A34Q6PIV7 304 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 WDFY1Q8IWB7 410 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 OR4P4Q8NGL7 312 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 SH3BGRL2Q9UJC5 107 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 HEATR1Q9H583 2144 aaKnown RBP8.02□□□□□ -1.13
COL28A1-201ENST00000399429 C5orf49A4QMS7 147 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 NEURL1O76050 574 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 VENTXO95231 258 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 DEFA4P12838 97 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 GZMHP20718 246 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 ATP5G3P48201 142 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 YPEL5P62699 121 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 DMWDQ09019 674 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 SNAI3Q3KNW1 292 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 BPIFA4PQ86YQ2 179 aa8.02□□□□□ -1.13
COL28A1-201ENST00000399429 PHF3Q92576 2039 aaKnown RBP8.02□□□□□ -1.13
COL28A1-201ENST00000399429 IGKV1-9A0A0C4DH69 117 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 SLC22A20A6NK97 555 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 FOXS1O43638 330 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 MRPL33O75394 65 aaKnown RBP8.01□□□□□ -1.13
COL28A1-201ENST00000399429 PGLYRP1O75594 196 aaPredicted RBP8.01□□□□□ -1.13
COL28A1-201ENST00000399429 CFIP05156 583 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 GRPP07492 148 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 ZNF32P17041 273 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 DRD1P21728 446 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 ACTL10Q5JWF8 245 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 AMMECR1LQ6DCA0 310 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 KLHDC3Q9BQ90 382 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 ZPBPQ9BS86 351 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 KIAA2026Q5HYC2 2103 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 GJE1A6NN92 205 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 ZNHIT1O43257 154 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 PIAS2O75928 621 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 NAPSAO96009 420 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 PFN1P07737 140 aaKnown RBP8.01□□□□□ -1.13
COL28A1-201ENST00000399429 CA6P23280 308 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 ATRXP46100 2492 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 PLAURQ03405 335 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 EDDM3AQ14507 147 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 OR4D5Q8NGN0 318 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 LYPD6BQ8NI32 183 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 ELSPBP1Q96BH3 223 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 ZNF319Q9P2F9 582 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 HSPB7Q9UBY9 170 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 ZNF835Q9Y2P0 537 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 OR2W1Q9Y3N9 320 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 ASXL3Q9C0F0 2248 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 ALPK3Q96L96 1907 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 WIPF3A6NGB9 483 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 S1PR2O95136 353 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 HAND1O96004 215 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 PSG1P11464 419 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 CD38P28907 300 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 PPOXP50336 477 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 HES3Q5TGS1 186 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 LILRA6Q6PI73 481 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 STPG4Q8N801 248 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 ORAOV1Q8WV07 137 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 ABHD14BQ96IU4 210 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 PSMG3Q9BT73 122 aaPredicted RBP8.01□□□□□ -1.13
COL28A1-201ENST00000399429 TRPM7Q96QT4 1865 aa8.01□□□□□ -1.13
COL28A1-201ENST00000399429 NKX6-3A6NJ46 265 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 H0Y980 276 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 CCL2P13500 99 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 BCL3P20749 454 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 PSG5Q15238 335 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 TDRG1Q3Y452 100 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 OR8B3Q8NGG8 313 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 RBM11P57052 281 aaKnown RBP8□□□□□ -1.13
COL28A1-201ENST00000399429 ZNF658BQ4V348 819 aaPredicted RBP8□□□□□ -1.13
COL28A1-201ENST00000399429 FAM162BQ5T6X4 162 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 LCN12Q6JVE5 192 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 TMEM108Q6UXF1 575 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 RFESDQ8TAC1 157 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 OR8B2Q96RD0 313 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 C20orf144Q9BQM9 153 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 VAMP5O95183 116 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 MT-ND6P03923 174 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 P04436 131 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 OR5AL1P0C617 328 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 OR8B8Q15620 311 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 LRRC75BQ2VPJ9 315 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 CEACAM16Q2WEN9 425 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 CLEC2AQ6UVW9 174 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 OR10G3Q8NGC4 313 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 TMEM56Q96MV1 263 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 OBP2BQ9NPH6 170 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 IGHV5-51A0A0C4DH38 117 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 DEFB108AA8MXU0 73 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 TGFBR3LH3BV60 316 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 SELENOTP62341 195 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 RHOBP62745 196 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 QRFPP83859 136 aa8□□□□□ -1.13
COL28A1-201ENST00000399429 WDR74Q6RFH5 385 aaPredicted RBP8□□□□□ -1.13
COL28A1-201ENST00000399429 C9orf40Q8IXQ3 194 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms