RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 OR2I1PQ8NGU4 316 aa7.24□□□□□ -1.25
SPTLC3-201ENST00000399002 OR5AC2Q9NZP5 309 aa7.24□□□□□ -1.25
SPTLC3-201ENST00000399002 OR2H2O95918 312 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 MUC1P15941 1255 aaPredicted RBP7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 ZXDAP98168 799 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 AESQ08117 197 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 TWIST1Q15672 202 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 EBLN2Q6P2I7 272 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 C12orf54Q6X4T0 127 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 FAM214BQ7L5A3 538 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 OR1P1Q8NH06 330 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 PRR13Q9NZ81 148 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 MIA3Q5JRA6 1907 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 ZNF729A6NN14 1252 aaPredicted RBP7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 UPK3AO75631 287 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 IBA57Q5T440 356 aaKnown RBP7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 TMEM78Q5T7P6 136 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 FAM219BQ5XKK7 198 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 UCN2Q96RP3 112 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 GPA33Q99795 319 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 SRD5A3Q9H8P0 318 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 SS18L1O75177 396 aaPredicted RBP7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 SRSF9Q13242 221 aaKnown RBP eCLIP7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 RTP5Q14D33 572 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 MRPL54Q6P161 138 aaKnown RBP7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 PRNTQ86SH4 94 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 OR4A5Q8NH83 315 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 ZCCHC14Q8WYQ9 949 aaKnown RBP7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 OR2J1Q9GZK6 312 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 CLEC5AQ9NY25 188 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 NRXN2Q9P2S2 1712 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 PTGDSP41222 190 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 SPANXN1Q5VSR9 72 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 TMEM70Q9BUB7 260 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 MICAL3Q7RTP6 2002 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 MYO18AQ92614 2054 aaKnown RBP7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 NPIPB6E9PJ23 425 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 CA2P00918 260 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 CD8AP01732 235 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 C16orf47Q6ZP98 133 aaPredicted RBP7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 TMEM252Q8N6L7 170 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 ZPLD1Q8TCW7 415 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 TAF15Q92804 592 aaKnown RBP eCLIP7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 RAB37Q96AX2 223 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 PLPPR2Q96GM1 343 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 KCNK7Q9Y2U2 307 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 SBF2Q86WG5 1849 aa7.23□□□□□ -1.25
SPTLC3-201ENST00000399002 VENTXO95231 258 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 PPP1CCP36873 323 aaKnown RBP7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 RND3P61587 244 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 FUT5Q11128 374 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 ZNF658BQ4V348 819 aaPredicted RBP7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 SLC35E4Q6ICL7 350 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 PCSK4Q6UW60 755 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 MTURNQ8N3F0 131 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 TMEM52Q8NDY8 209 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 TMEM186Q96B77 213 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 GALNT14Q96FL9 552 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 Q96M66 194 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 CDX2Q99626 313 aaPredicted RBP7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 COX6CP09669 75 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 RPL31P62899 125 aaKnown RBP7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 MEF2BQ02080 365 aaPredicted RBP7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 OR2D3Q8NGH3 330 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 MAP1LC3AQ9H492 121 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 DTX4Q9Y2E6 619 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 EML2O95834 649 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 MAS1LP35410 378 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 TCL1AP56279 114 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 RPL8P62917 257 aaKnown RBP7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 WDR25Q64LD2 544 aaPredicted RBP7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 ZNF385AQ96PM9 386 aaKnown RBP7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 G6PC2Q9NQR9 355 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 IL36RNQ9UBH0 155 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 IGHV3OR15-7A0A075B7D8 119 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 IGKV1-8A0A0C4DH67 115 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 DANCRP0C864 163 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 CTSSP25774 331 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 CEBPDP49716 269 aaPredicted RBP7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 RELQ04864 619 aaPredicted RBP7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 MMDQ15546 238 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 ZNF660Q6AZW8 331 aaPredicted RBP7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 OR8A1Q8NGG7 326 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 SPSB4Q96A44 273 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 SOX21Q9Y651 276 aaPredicted RBP7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 SIRT4Q9Y6E7 314 aaPredicted RBP7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 RALGAPA2Q2PPJ7 1873 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 A0A1B0GW15 77 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 TMEM229AB2RXF0 380 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 OR2A4O95047 310 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 GPR6P46095 362 aaPredicted RBP7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 TMEM187Q14656 261 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 FAM222BQ8WU58 562 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 TMEM171Q8WVE6 324 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 ISOC2Q96AB3 205 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 OR2A7Q96R45 310 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 UQCR10Q9UDW1 63 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 RABAC1Q9UI14 185 aa7.22□□□□□ -1.25
SPTLC3-201ENST00000399002 A0A0J9YW62 118 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms