RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 RBMS3Q6XE24 437 aaKnown RBP4.24□□□□□ -1.73
SMAD4-202ENST00000398417 FOXL2NBQ6ZUU3 175 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 SSX7Q7RTT5 188 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 APOBEC3DQ96AK3 386 aaPredicted RBP4.24□□□□□ -1.73
SMAD4-202ENST00000398417 MOB3AQ96BX8 217 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 COMMD5Q9GZQ3 224 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 GFOD1Q9NXC2 390 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 MOB4Q9Y3A3 225 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 TMED3Q9Y3Q3 217 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 RRP8O43159 456 aaKnown RBP4.24□□□□□ -1.73
SMAD4-202ENST00000398417 CRXO43186 299 aaPredicted RBP4.24□□□□□ -1.73
SMAD4-202ENST00000398417 CYC1P08574 325 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 SELENOTP62341 195 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 SSPNQ14714 243 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 HMGN3Q15651 99 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 TMEM105Q8N8V8 129 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 RFESDQ8TAC1 157 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 C18orf12Q96KH6 178 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 DECR2Q9NUI1 292 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 PLA2G2EQ9NZK7 142 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 GOLT1BQ9Y3E0 138 aa4.24□□□□□ -1.73
SMAD4-202ENST00000398417 CNOT1A5YKK6 2376 aaKnown RBP4.24□□□□□ -1.73
SMAD4-202ENST00000398417 KLRC4-KLRK1H3BQV0 150 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 FAM157CP0CG43 387 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 FABP2P12104 132 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 CD46P15529 392 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 BMP5P22003 454 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 CFPP27918 469 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 ANKRD29Q8N6D5 301 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 OR10J5Q8NHC4 309 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 CLDN23Q96B33 292 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 MTCH1Q9NZJ7 389 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 IL17BQ9UHF5 180 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 ANAPC10Q9UM13 185 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 IGKV1D-13A0A0B4J2D9 117 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 BMPR1BO00238 502 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 KLF7O75840 302 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-202ENST00000398417 IGKV1-13P0DP09 117 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 ADIRFQ15847 76 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 TBC1D28Q2M2D7 210 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 TPRX1Q8N7U7 411 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 OR52L2PQ8NGH6 319 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 RAB37Q96AX2 223 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 Q9N2K0 584 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 OR1A1Q9P1Q5 309 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 LRRC3CA6NJW4 275 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 SNCAP37840 140 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 CEACAM6P40199 344 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 RSPO1Q2MKA7 263 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-202ENST00000398417 PRAMEF6Q5VXH4 476 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 SSX9Q7RTT3 188 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 GINS3Q9BRX5 216 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 SOX21Q9Y651 276 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-202ENST00000398417 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-202ENST00000398417 DFFBO76075 338 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 HBE1P02100 147 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 MT-ND6P03923 174 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 MPLP40238 635 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 B3GALT5-AS1P59052 145 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 ABLIM2Q6H8Q1 611 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 TMEM251Q8N6I4 163 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 ZBTB34Q8NCN2 500 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 S1PR3Q99500 378 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 VSIRQ9H7M9 311 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 TINAGQ9UJW2 476 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 KLF13Q9Y2Y9 288 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-202ENST00000398417 FBLL1A6NHQ2 334 aaKnown RBP4.23□□□□□ -1.73
SMAD4-202ENST00000398417 DBX1A6NMT0 343 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF716A6NP11 495 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 H0YL77 283 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 RAB29O14966 203 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 NDUFA2O43678 99 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 TIMM8AO60220 97 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-202ENST00000398417 CNIH1O95406 144 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 CTXN2P0C2S0 81 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 SCGB1C2P0DMR2 95 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 PMELP40967 661 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 ERVK-16P61578 105 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 HLA-DRB3P79483 266 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 ACSF3Q4G176 576 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-202ENST00000398417 TMEM211Q6ICI0 200 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 PLPPR1Q8TBJ4 325 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 RBFOX3A6NFN3 312 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 NPIPB13A6NJU9 1138 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 NPIPB4C9JG80 1138 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 TCAPO15273 167 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 OR2C1O95371 312 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 SP1P08047 785 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 OR8B8Q15620 311 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF343Q6P1L6 599 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 DMBX1Q8NFW5 382 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 OR1K1Q8NGR3 316 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 C10orf35Q96D05 121 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 GNPNAT1Q96EK6 184 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-202ENST00000398417 RASL11BQ9BPW5 248 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 RIMS4Q9H426 269 aaPredicted RBP4.23□□□□□ -1.73
SMAD4-202ENST00000398417 TMEM100Q9NV29 134 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 GAB2Q9UQC2 676 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 ATP23Q9Y6H3 246 aa4.23□□□□□ -1.73
SMAD4-202ENST00000398417 ZNF815PA8K554 130 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms