RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 FUNDC1Q8IVP5 155 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 TMEM251Q8N6I4 163 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 DNAAF3Q8N9W5 541 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 OR10D3Q8NH80 312 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 MFSD8Q8NHS3 518 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 ASB13Q8WXK3 278 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 TLCD1Q96CP7 247 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 ABHD14BQ96IU4 210 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 PACRGQ96M98 296 aaPredicted RBP1.16□□□□□ -2.22
CD47-203ENST00000398258 TBX5Q99593 518 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 DCUN1D5Q9BTE7 237 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 EIF5A2Q9GZV4 153 aaKnown RBP1.16□□□□□ -2.22
CD47-203ENST00000398258 MS4A6AQ9H2W1 248 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 HHLA2Q9UM44 414 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 CCL26Q9Y258 94 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 C15orf41Q9Y2V0 281 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 ZNF337Q9Y3M9 751 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 ATP6V1DQ9Y5K8 247 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 LTBP2Q14767 1821 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 ATAD5Q96QE3 1844 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 A0A1W2PP64 1363 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 DHX57Q6P158 1386 aaKnown RBP1.16□□□□□ -2.22
CD47-203ENST00000398258 MAP3K5Q99683 1374 aa1.16□□□□□ -2.22
CD47-203ENST00000398258 TRPM3Q9HCF6 1732 aaPredicted RBP1.15□□□□□ -2.22
CD47-203ENST00000398258 TEX50A0A1B0GTY4 177 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 TINCRA0A1B0GVN0 87 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 LINC00862A6NCI5 91 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 ODF3BA8MYP8 253 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 GOLGA8KD6RF30 607 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 GOLGA8MH3BSY2 632 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 J3QRE1 110 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 AZIN1O14977 448 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 ZW10O43264 779 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 COCHO43405 550 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 STK16O75716 305 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 ATP6V1G2O95670 118 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 HBZP02008 142 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 CRYGDP07320 174 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 NPPCP23582 126 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 ATP6V0CP27449 155 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 CD40LGP29965 261 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 BLVRBP30043 206 aaPredicted RBP1.15□□□□□ -2.23
CD47-203ENST00000398258 TSPEAR-AS2P59090 65 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 SLC35A2P78381 396 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 SMAGPQ0VAQ4 97 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 TMEM267Q0VDI3 215 aaPredicted RBP1.15□□□□□ -2.23
CD47-203ENST00000398258 FOXF1Q12946 379 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 SLC36A2Q495M3 483 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 FAM229BQ4G0N7 80 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 DNAL1Q4LDG9 190 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 MSRB3Q8IXL7 192 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 Q8N402 240 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 TMEM156Q8N614 296 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 FNDC9Q8TBE3 224 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 SLC37A2Q8TED4 501 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 CPNE2Q96FN4 548 aaPredicted RBP1.15□□□□□ -2.23
CD47-203ENST00000398258 CAPZA3Q96KX2 299 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 DHRS9Q9BPW9 319 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 ZNF471Q9BX82 626 aaPredicted RBP1.15□□□□□ -2.23
CD47-203ENST00000398258 CDCA4Q9BXL8 241 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 MROQ9BYG7 248 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 AICDAQ9GZX7 198 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 TUBA4BQ9H853 241 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 ZNHIT6Q9NWK9 470 aaKnown RBP1.15□□□□□ -2.23
CD47-203ENST00000398258 NOSIPQ9Y314 301 aaKnown RBP1.15□□□□□ -2.23
CD47-203ENST00000398258 KLK5Q9Y337 293 aaPredicted RBP1.15□□□□□ -2.23
CD47-203ENST00000398258 SLIT2O94813 1529 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 PLCH2O75038 1416 aa1.15□□□□□ -2.23
CD47-203ENST00000398258 A0A0A6YYH2 397 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 C19orf71A6NCJ1 209 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 A6NJ64 397 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 TPM3P06753 285 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 OR10J1P30954 320 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 IFNGR2P38484 337 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 GABRA4P48169 554 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 KRTAP12-4P60329 112 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 ACTBP60709 375 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 RPS24P62847 133 aaKnown RBP1.14□□□□□ -2.23
CD47-203ENST00000398258 HERVK_113P63121 156 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 ACTG1P63261 375 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 FABP5Q01469 135 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 ZNF181Q2M3W8 571 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 ZNF322Q6U7Q0 402 aaPredicted RBP1.14□□□□□ -2.23
CD47-203ENST00000398258 FAM151BQ6UXP7 276 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 ZNF567Q8N184 647 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 Q8NDZ9 215 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 OR11H1Q8NG94 326 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 OR4C16Q8NGL9 310 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 CMTM5Q96DZ9 223 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 KCTD7Q96MP8 289 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 NKX6-2Q9C056 277 aaPredicted RBP1.14□□□□□ -2.23
CD47-203ENST00000398258 CXCL16Q9H2A7 254 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 DNAJC12Q9UKB3 198 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 ALG5Q9Y673 324 aa1.14□□□□□ -2.23
CD47-203ENST00000398258 THSD7AQ9UPZ6 1657 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 DSCAML1Q8TD84 2053 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 TRAV8-1A0A0A6YYK1 113 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 IGHV3-15A0A0B4J1V0 119 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 ZNF878C9JN71 531 aa1.13□□□□□ -2.23
CD47-203ENST00000398258 F5H768 121 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms