RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 CFDP00746 253 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-206ENST00000397617 KLK2P20151 261 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 CD40P25942 277 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 PPOXP50336 477 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 DVL1P1P54792 670 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-206ENST00000397617 SELENOTP62341 195 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 HFEQ30201 348 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 ZNF474Q6S9Z5 364 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-206ENST00000397617 SLC22A25Q6T423 547 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 SPACA3Q8IXA5 215 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 TMEM252Q8N6L7 170 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 ARL6IP6Q8N6S5 226 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 CNEP1R1Q8N9A8 125 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 OR10K1Q8NGX5 313 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 C8orf46Q8TAG6 207 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 MBD3L1Q8WWY6 194 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 BEX2Q9BXY8 128 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 CSAG2Q9Y5P2 127 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 C17orf100A8MU93 164 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 FAM157CP0CG43 387 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 PEA15Q15121 130 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 SEM1Q6ZVN7 128 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 OR4A5Q8NH83 315 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 DVL3Q92997 716 aaPredicted RBP4.93□□□□□ -1.62
PTPRD-206ENST00000397617 TMEM242Q9NWH2 141 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 MLNRO43193 412 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 CRYZL1O95825 349 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 IFNA5P01569 189 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 IFNA17P01571 189 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 FLNAP21333 2647 aaKnown RBP4.93□□□□□ -1.62
PTPRD-206ENST00000397617 TLE4Q04727 773 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 C11orf53Q8IXP5 236 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 ST6GALNAC5Q9BVH7 336 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 PRNDQ9UKY0 176 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 NKX6-3A6NJ46 265 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 H0YIZ8 118 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 RAB13P51153 203 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 ZNF645Q8N7E2 425 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 DMBX1Q8NFW5 382 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 OR1L6Q8NGR2 347 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 CASTOR1Q8WTX7 329 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 TRIB1Q96RU8 372 aa4.93□□□□□ -1.62
PTPRD-206ENST00000397617 CORTO00230 105 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 TIMM8AO60220 97 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-206ENST00000397617 SRYQ05066 204 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 VWC2Q2TAL6 325 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 STUMQ69YW2 141 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 SCGB1C1Q8TD33 95 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 TMEM186Q96B77 213 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 CXorf58Q96LI9 332 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 DEFB127Q9H1M4 99 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 SPANXA1Q9NS26 97 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 C19orf12Q9NSK7 152 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 LIPGQ9Y5X9 500 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 VPS13AQ96RL7 3174 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 KIAA1324LA8MWY0 1029 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-206ENST00000397617 SNCGO76070 127 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 CD5P06127 495 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 OR5AC1P0C628 307 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 RAB32Q13637 225 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 GUCA2BQ16661 112 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 C17orf107Q6ZR85 190 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 DCUN1D4Q92564 292 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 TXN2Q99757 166 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 ZNF665Q9H7R5 613 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 C12orf77C9JDV5 145 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 CA6P23280 308 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 THBS3P49746 956 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 COX19Q49B96 90 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 DOLPP1Q86YN1 238 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 TRAPPC2LQ9UL33 140 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 RCL1Q9Y2P8 373 aaKnown RBP4.92□□□□□ -1.62
PTPRD-206ENST00000397617 PPIAL4EA0A075B759 164 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 PPIAL4CA0A0B4J2A2 164 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 KBTBD11-OT1A0A1B0GTJ5 212 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 PPIAL4DF5H284 164 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 I3L521 148 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 CDIPTO14735 213 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 PMP2P02689 132 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 PPIAL4FP0DN26 164 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 PTHLHP12272 177 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 GLRA1P23415 457 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 MAS1LP35410 378 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 MRGPRDQ8TDS7 321 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 NEU4Q8WWR8 484 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-206ENST00000397617 TOMM40LQ969M1 308 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 BARX1Q9HBU1 254 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-206ENST00000397617 CLN8Q9UBY8 286 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 A0A096LPE4 126 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 A0A1W2PPZ6 126 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 TOXO94900 526 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 CD99P14209 185 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 PRDX2P32119 198 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 PSMB3P49720 205 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 SMIM15Q7Z3B0 74 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 ZNF610Q8N9Z0 462 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 IGHV1-18A0A0C4DH31 117 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 OPN1LWP04000 364 aa4.92□□□□□ -1.62
PTPRD-206ENST00000397617 EIF4EBP1Q13541 118 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-206ENST00000397617 PIGYQ3MUY2 71 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms