RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 TCTE3Q8IZS6 198 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 OR10A7Q8NGE5 316 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 OR4P4Q8NGL7 312 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 OR4C13Q8NGP0 309 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 OR13A1Q8NGR1 328 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 PLPPR1Q8TBJ4 325 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 NPFFR1Q9GZQ6 430 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 C20orf85Q9H1P6 137 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 SLC2A8Q9NY64 477 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 SCP2D1Q9UJQ7 156 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 TCF19Q9Y242 345 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 HILPDAQ9Y5L2 63 aa11.75□□□□□ -0.53
SEC13-208ENST00000397109 A0A0A6YYD4 124 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 TMEM30CPA0ZSE6 113 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 LEUTXA8MZ59 168 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 ZNF736B4DX44 427 aaPredicted RBP11.74□□□□□ -0.53
SEC13-208ENST00000397109 IGLV1-47P01700 117 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 GLAP06280 429 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 PTHLHP12272 177 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 HIST1H1DP16402 221 aaKnown RBP11.74□□□□□ -0.53
SEC13-208ENST00000397109 NAT1P18440 290 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 CCR6P51684 374 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 RBM39Q14498 530 aaKnown RBP11.74□□□□□ -0.53
SEC13-208ENST00000397109 MOGAT2Q3SYC2 334 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 ACTBL2Q562R1 376 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 PRR31Q5SQ13 230 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 OR9G1Q8NH87 305 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 NEK7Q8TDX7 302 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 KIRREL1Q96J84 757 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 ST6GAL2Q96JF0 529 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 CITED1Q99966 193 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 OCSTAMPQ9BR26 566 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 ZNF286AQ9HBT8 521 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 GPN1Q9HCN4 374 aaPredicted RBP11.74□□□□□ -0.53
SEC13-208ENST00000397109 MCUBQ9NWR8 336 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 IDI2-AS1Q9NZ38 188 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 HSF4Q9ULV5 492 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 ANAPC10Q9UM13 185 aa11.74□□□□□ -0.53
SEC13-208ENST00000397109 MGAM2Q2M2H8 2515 aa11.73□□□□□ -0.53
SEC13-208ENST00000397109 TRAV6A0A075B6T7 132 aa11.73□□□□□ -0.53
SEC13-208ENST00000397109 A6NDX4 124 aa11.73□□□□□ -0.53
SEC13-208ENST00000397109 SNRPGP15A8MWD9 76 aa11.73□□□□□ -0.53
SEC13-208ENST00000397109 DISC1C4P0D8 188 aa11.73□□□□□ -0.53
SEC13-208ENST00000397109 MCRIP1C9JLW8 97 aa11.73□□□□□ -0.53
SEC13-208ENST00000397109 NPIPB11E5RHQ5 1161 aa11.73□□□□□ -0.53
SEC13-208ENST00000397109 F2RL2O00254 374 aa11.73□□□□□ -0.53
SEC13-208ENST00000397109 RAB3DO95716 219 aa11.73□□□□□ -0.53
SEC13-208ENST00000397109 NFYBP25208 207 aa11.73□□□□□ -0.53
SEC13-208ENST00000397109 RAB13P51153 203 aa11.73□□□□□ -0.53
SEC13-208ENST00000397109 HLA-DRB5Q30154 266 aa11.73□□□□□ -0.53
SEC13-208ENST00000397109 OR4C16Q8NGL9 310 aa11.73□□□□□ -0.53
SEC13-208ENST00000397109 MRGPRDQ8TDS7 321 aa11.73□□□□□ -0.53
SEC13-208ENST00000397109 NICN1Q9BSH3 213 aa11.73□□□□□ -0.53
SEC13-208ENST00000397109 MED28Q9H204 178 aa11.73□□□□□ -0.53
SEC13-208ENST00000397109 ZNF581Q9P0T4 197 aa11.73□□□□□ -0.53
SEC13-208ENST00000397109 TMEM235A6NFC5 223 aa11.72□□□□□ -0.53
SEC13-208ENST00000397109 OOSP1A8MZH6 123 aa11.72□□□□□ -0.53
SEC13-208ENST00000397109 BUB1B-PAK6H3BSN5 160 aa11.72□□□□□ -0.53
SEC13-208ENST00000397109 MFNGO00587 321 aa11.72□□□□□ -0.53
SEC13-208ENST00000397109 TIMM23O14925 209 aa11.72□□□□□ -0.53
SEC13-208ENST00000397109 PDCD6O75340 191 aa11.72□□□□□ -0.53
SEC13-208ENST00000397109 CD3DP04234 171 aa11.72□□□□□ -0.53
SEC13-208ENST00000397109 FUT3P21217 361 aa11.72□□□□□ -0.53
SEC13-208ENST00000397109 CHATP28329 748 aa11.72□□□□□ -0.53
SEC13-208ENST00000397109 BRS3P32247 399 aa11.72□□□□□ -0.53
SEC13-208ENST00000397109 TMEM50BP56557 158 aa11.72□□□□□ -0.53
SEC13-208ENST00000397109 GNG2P59768 71 aa11.72□□□□□ -0.53
SEC13-208ENST00000397109 CCDC144NLQ6NUI1 221 aa11.72□□□□□ -0.53
SEC13-208ENST00000397109 OR2T6Q8NHC8 308 aa11.72□□□□□ -0.53
SEC13-208ENST00000397109 PRRT1Q99946 306 aa11.72□□□□□ -0.53
SEC13-208ENST00000397109 OR51J1Q9H342 316 aa11.72□□□□□ -0.53
SEC13-208ENST00000397109 RAB9BQ9NP90 201 aa11.72□□□□□ -0.53
SEC13-208ENST00000397109 AMMECR1Q9Y4X0 333 aaPredicted RBP11.72□□□□□ -0.53
SEC13-208ENST00000397109 FAM172BPA6NC97 362 aa11.71□□□□□ -0.53
SEC13-208ENST00000397109 CHST1O43916 411 aa11.71□□□□□ -0.53
SEC13-208ENST00000397109 SNAPC5O75971 98 aa11.71□□□□□ -0.53
SEC13-208ENST00000397109 GLDNQ6ZMI3 551 aaPredicted RBP11.71□□□□□ -0.53
SEC13-208ENST00000397109 ZNF497Q6ZNH5 498 aa11.71□□□□□ -0.53
SEC13-208ENST00000397109 RFESDQ8TAC1 157 aa11.71□□□□□ -0.53
SEC13-208ENST00000397109 IFT46Q9NQC8 304 aa11.71□□□□□ -0.53
SEC13-208ENST00000397109 J3QR06 171 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 SOCS1O15524 211 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 GNB3P16520 340 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 BLVRBP30043 206 aaPredicted RBP11.7□□□□□ -0.54
SEC13-208ENST00000397109 SSTR5P35346 364 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 SRSF4Q08170 494 aaKnown RBP11.7□□□□□ -0.54
SEC13-208ENST00000397109 CD300CQ08708 224 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 CDK10Q15131 360 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 RNASE10Q5GAN6 216 aaKnown RBP11.7□□□□□ -0.54
SEC13-208ENST00000397109 PLAC9Q5JTB6 97 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 TPTE2P1Q5T6R2 138 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 C16orf82Q7Z2V1 217 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 TMEM219Q86XT9 240 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 GAPTQ8N292 157 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 OR52M1Q8NGK5 317 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 CCDC107Q8WV48 283 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 GIMAP1Q8WWP7 306 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 ARL11Q969Q4 196 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 GINS4Q9BRT9 223 aa11.7□□□□□ -0.54
SEC13-208ENST00000397109 PRSS22Q9GZN4 317 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms