RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 RNASEK-C17orf49H0YIS7 233 aa12.36□□□□□ -0.43
TM9SF1-202ENST00000396854 OR7C1O76099 320 aaPredicted RBP12.36□□□□□ -0.43
TM9SF1-202ENST00000396854 IGHV4-39P01824 125 aa12.36□□□□□ -0.43
TM9SF1-202ENST00000396854 CD5P06127 495 aa12.36□□□□□ -0.43
TM9SF1-202ENST00000396854 PSG2P11465 335 aa12.36□□□□□ -0.43
TM9SF1-202ENST00000396854 DUSP1P28562 367 aa12.36□□□□□ -0.43
TM9SF1-202ENST00000396854 F2RL1P55085 397 aa12.36□□□□□ -0.43
TM9SF1-202ENST00000396854 ABCA11PQ4W5N1 156 aa12.36□□□□□ -0.43
TM9SF1-202ENST00000396854 STUMQ69YW2 141 aa12.36□□□□□ -0.43
TM9SF1-202ENST00000396854 LYPD6BQ8NI32 183 aa12.36□□□□□ -0.43
TM9SF1-202ENST00000396854 TOMM40LQ969M1 308 aa12.36□□□□□ -0.43
TM9SF1-202ENST00000396854 ARV1Q9H2C2 271 aa12.36□□□□□ -0.43
TM9SF1-202ENST00000396854 PLA2G2EQ9NZK7 142 aa12.36□□□□□ -0.43
TM9SF1-202ENST00000396854 WIPI2Q9Y4P8 454 aa12.36□□□□□ -0.43
TM9SF1-202ENST00000396854 LSM5Q9Y4Y9 91 aaKnown RBP12.36□□□□□ -0.43
TM9SF1-202ENST00000396854 TRAV38-1A0A0B4J264 116 aa12.35□□□□□ -0.43
TM9SF1-202ENST00000396854 E5RGE8 158 aa12.35□□□□□ -0.43
TM9SF1-202ENST00000396854 H7C1Q1 480 aa12.35□□□□□ -0.43
TM9SF1-202ENST00000396854 FBXO24O75426 580 aa12.35□□□□□ -0.43
TM9SF1-202ENST00000396854 HAND1O96004 215 aa12.35□□□□□ -0.43
TM9SF1-202ENST00000396854 UCP3P55916 312 aa12.35□□□□□ -0.43
TM9SF1-202ENST00000396854 RTN4IP1Q8WWV3 396 aaPredicted RBP12.35□□□□□ -0.43
TM9SF1-202ENST00000396854 C18orf12Q96KH6 178 aa12.35□□□□□ -0.43
TM9SF1-202ENST00000396854 SPACA1Q9HBV2 294 aa12.35□□□□□ -0.43
TM9SF1-202ENST00000396854 NSG2Q9Y328 171 aa12.35□□□□□ -0.43
TM9SF1-202ENST00000396854 IGKV1D-17A0A075B6S4 117 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 IGHV3OR15-7A0A075B7D8 119 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 SH2D1BO14796 132 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 OR2H2O95918 312 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 MBPP02686 304 aaPredicted RBP12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 OR5AC1P0C628 307 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 LMO1P25800 156 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 ZNF286AQ9HBT8 521 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 ZFP57Q9NU63 452 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 OR14J1Q9UGF5 321 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 CENPEQ02224 2701 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 FAM157AC9JC47 383 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 ZNF205O95201 554 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 IGHV2-70P01814 119 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 GLAP06280 429 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 SFTA3P0C7M3 94 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 PDCD1Q15116 288 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 LIAT1Q6ZQX7 453 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 CD177Q8N6Q3 437 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 DYRK2Q92630 601 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 MOB3AQ96BX8 217 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 SLC2A9Q9NRM0 540 aa12.34□□□□□ -0.43
TM9SF1-202ENST00000396854 TRAV24A0A0B4J272 114 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 SLC33A1O00400 549 aaPredicted RBP12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 DEGS1O15121 323 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 SCGB1D2O95969 90 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 ZNF44P15621 663 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 PRDX2P32119 198 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 CEBPDP49716 269 aaPredicted RBP12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 ATP5J2P56134 94 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 SP6Q3SY56 376 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 Q6ZRG5 221 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 LINC00518Q8N0U6 118 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 MLXQ9UH92 298 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 APCP25054 2843 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 TNFRSF13BO14836 293 aaPredicted RBP12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 GPR137BO60478 399 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 MDH2P40926 338 aaKnown RBP12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 DVL1P1P54792 670 aaPredicted RBP12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 FXYD4P59646 89 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 GPR157Q5UAW9 335 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 Q6ZS49 121 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 LGI3Q8N145 548 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 DEFB108BQ8NET1 73 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 MSI2Q96DH6 328 aaKnown RBP12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 SDSLQ96GA7 329 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 TIMD4Q96H15 378 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 RSRP1Q9BUV0 290 aa12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 SAV1Q9H4B6 383 aaPredicted RBP12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 FAM212BQ9NTI7 297 aaPredicted RBP12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 BEX4Q9NWD9 120 aaPredicted RBP12.33□□□□□ -0.44
TM9SF1-202ENST00000396854 SIRPB1O00241 398 aa12.32□□□□□ -0.44
TM9SF1-202ENST00000396854 GYPAP02724 150 aa12.32□□□□□ -0.44
TM9SF1-202ENST00000396854 SEC11BP0C7V7 166 aa12.32□□□□□ -0.44
TM9SF1-202ENST00000396854 SRSF7Q16629 238 aaKnown RBP eCLIP12.32□□□□□ -0.44
TM9SF1-202ENST00000396854 SHEQ5VZ18 495 aa12.32□□□□□ -0.44
TM9SF1-202ENST00000396854 ZNF788Q6ZQV5 615 aa12.32□□□□□ -0.44
TM9SF1-202ENST00000396854 LYZL2Q7Z4W2 148 aa12.32□□□□□ -0.44
TM9SF1-202ENST00000396854 IQCF2Q8IXL9 164 aa12.32□□□□□ -0.44
TM9SF1-202ENST00000396854 COMMD1Q8N668 190 aa12.32□□□□□ -0.44
TM9SF1-202ENST00000396854 ZNF525Q8N782 197 aa12.32□□□□□ -0.44
TM9SF1-202ENST00000396854 SUMF2Q8NBJ7 301 aa12.32□□□□□ -0.44
TM9SF1-202ENST00000396854 GLYATL2Q8WU03 294 aa12.32□□□□□ -0.44
TM9SF1-202ENST00000396854 RAB1CQ92928 201 aa12.32□□□□□ -0.44
TM9SF1-202ENST00000396854 SMIM3Q9BZL3 60 aa12.32□□□□□ -0.44
TM9SF1-202ENST00000396854 METRNQ9UJH8 293 aa12.32□□□□□ -0.44
TM9SF1-202ENST00000396854 ZNF737O75373 536 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 GLP1RP43220 463 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 GABRA2P47869 451 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 P2RY1P47900 373 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 COL10A1Q03692 680 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 PHLDA2Q53GA4 152 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 BRICD5Q6PL45 260 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 Q6ZPA2 131 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 ZNF561Q8N587 486 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms