RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 RAB40CQ96S21 281 aa12.46□□□□□ -0.41
CBX3-202ENST00000396386 HRH4Q9H3N8 390 aa12.46□□□□□ -0.41
CBX3-202ENST00000396386 PLA2G2EQ9NZK7 142 aa12.46□□□□□ -0.41
CBX3-202ENST00000396386 TMA7Q9Y2S6 64 aaKnown RBP12.46□□□□□ -0.41
CBX3-202ENST00000396386 KIAA1324LA8MWY0 1029 aaPredicted RBP12.46□□□□□ -0.42
CBX3-202ENST00000396386 M6PRP20645 277 aa12.46□□□□□ -0.42
CBX3-202ENST00000396386 OMGP23515 440 aa12.46□□□□□ -0.42
CBX3-202ENST00000396386 F2RL1P55085 397 aa12.46□□□□□ -0.42
CBX3-202ENST00000396386 CR1LQ2VPA4 569 aa12.46□□□□□ -0.42
CBX3-202ENST00000396386 ZNF66Q6ZN08 573 aa12.46□□□□□ -0.42
CBX3-202ENST00000396386 Q6ZRM9 215 aa12.46□□□□□ -0.42
CBX3-202ENST00000396386 STX12Q86Y82 276 aa12.46□□□□□ -0.42
CBX3-202ENST00000396386 HSD17B11Q8NBQ5 300 aa12.46□□□□□ -0.42
CBX3-202ENST00000396386 ZNRF1Q8ND25 227 aa12.46□□□□□ -0.42
CBX3-202ENST00000396386 C14orf79Q96F83 325 aa12.46□□□□□ -0.42
CBX3-202ENST00000396386 DIRC2Q96SL1 478 aa12.46□□□□□ -0.42
CBX3-202ENST00000396386 RAXQ9Y2V3 346 aa12.46□□□□□ -0.42
CBX3-202ENST00000396386 MMP24Q9Y5R2 645 aa12.46□□□□□ -0.42
CBX3-202ENST00000396386 TANC2Q9HCD6 1990 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 DMXL2Q8TDJ6 3036 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 MEX3AA1L020 520 aaKnown RBP12.45□□□□□ -0.42
CBX3-202ENST00000396386 ATG12O94817 140 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 IRF2P14316 349 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 ASCL1P50553 236 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 PAX9P55771 341 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 EDDM3BP56851 147 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 RPL30P62888 115 aaKnown RBP12.45□□□□□ -0.42
CBX3-202ENST00000396386 ADIPOQQ15848 244 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 Q3ZCU0 254 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 STUMQ69YW2 141 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 HSD17B10Q99714 261 aaKnown RBP12.45□□□□□ -0.42
CBX3-202ENST00000396386 VKORC1Q9BQB6 163 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 SH3BGRL3Q9H299 93 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 NCOR1P1Q9H4R4 102 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 COA4Q9NYJ1 87 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 OR6C3Q9NZP0 311 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 GNG12Q9UBI6 72 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 PSG11Q9UQ72 335 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 ACACAQ13085 2346 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 FAM208BQ5VWN6 2430 aa12.45□□□□□ -0.42
CBX3-202ENST00000396386 ST8SIA5O15466 376 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 SYNGR2O43760 224 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 CYB5R3P00387 301 aaPredicted RBP12.44□□□□□ -0.42
CBX3-202ENST00000396386 APOC3P02656 99 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 OR4A8P0C604 315 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 DANCRP0C864 163 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 RAB5CP51148 216 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 DYNLT3P51808 116 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 LTC4SQ16873 150 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 OR2B11Q5JQS5 317 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 FAM201AQ5SY85 155 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 BTNL8Q6UX41 500 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 BTNL3Q6UXE8 466 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 ODF3L1Q8IXM7 274 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 OR5C1Q8NGR4 320 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 SDSLQ96GA7 329 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 RAB9BQ9NP90 201 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 STRAPQ9Y3F4 350 aaKnown RBP12.44□□□□□ -0.42
CBX3-202ENST00000396386 WSB1Q9Y6I7 421 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 DEFB108AA8MXU0 73 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 B8ZZF3 427 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 FAM90A26D6RGX4 464 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 F2RL2O00254 374 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 RAMP3O60896 148 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 CST7O76096 145 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 CLDN1O95832 211 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 CD55P08174 381 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 ZNF816Q0VGE8 651 aaPredicted RBP12.44□□□□□ -0.42
CBX3-202ENST00000396386 ZNF295-AS1Q8N0V1 137 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 SPAG16Q8N0X2 631 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 MS4A7Q9GZW8 240 aaPredicted RBP12.44□□□□□ -0.42
CBX3-202ENST00000396386 NGBQ9NPG2 151 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 CALYQ9NYX4 217 aa12.44□□□□□ -0.42
CBX3-202ENST00000396386 CADP27708 2225 aa12.43□□□□□ -0.42
CBX3-202ENST00000396386 TMEM218A2RU14 115 aa12.43□□□□□ -0.42
CBX3-202ENST00000396386 TXNL1O43396 289 aa12.43□□□□□ -0.42
CBX3-202ENST00000396386 YPEL1O60688 119 aa12.43□□□□□ -0.42
CBX3-202ENST00000396386 TNFRSF1AP19438 455 aa12.43□□□□□ -0.42
CBX3-202ENST00000396386 GPR12P47775 334 aa12.43□□□□□ -0.42
CBX3-202ENST00000396386 CAMLGP49069 296 aa12.43□□□□□ -0.42
CBX3-202ENST00000396386 CASP6P55212 293 aa12.43□□□□□ -0.42
CBX3-202ENST00000396386 ADAM5Q6NVV9 412 aa12.43□□□□□ -0.42
CBX3-202ENST00000396386 FGFRL1Q8N441 504 aa12.43□□□□□ -0.42
CBX3-202ENST00000396386 YPEL2Q96QA6 119 aa12.43□□□□□ -0.42
CBX3-202ENST00000396386 ATP5SQ99766 215 aa12.43□□□□□ -0.42
CBX3-202ENST00000396386 TREM1Q9NP99 234 aa12.43□□□□□ -0.42
CBX3-202ENST00000396386 LAMP3Q9UQV4 416 aa12.43□□□□□ -0.42
CBX3-202ENST00000396386 MGAQ8IWI9 3026 aa12.43□□□□□ -0.42
CBX3-202ENST00000396386 DYSFO75923 2080 aa12.43□□□□□ -0.42
CBX3-202ENST00000396386 TRGV8A0A0C4DH27 118 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 C17orf100A8MU93 164 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 C17orf98A8MV24 154 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 H3BP45 60 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 TOR1AO14656 332 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 S1PR2O95136 353 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 P0C879 139 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 IAPPP10997 89 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 SELLP14151 372 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 SULT1A1P50225 295 aa12.42□□□□□ -0.42
CBX3-202ENST00000396386 AKR1C1Q04828 323 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms