RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 PARD6GQ9BYG4 376 aaPredicted RBP14.03□□□□□ -0.16
NUP50-202ENST00000396096 IGKV1D-17A0A075B6S4 117 aa14.02□□□□□ -0.16
NUP50-202ENST00000396096 H3BP45 60 aa14.02□□□□□ -0.16
NUP50-202ENST00000396096 SPINT2O43291 252 aa14.02□□□□□ -0.16
NUP50-202ENST00000396096 OR8U8P0C7N1 319 aa14.02□□□□□ -0.16
NUP50-202ENST00000396096 KLF3P57682 345 aaPredicted RBP14.02□□□□□ -0.16
NUP50-202ENST00000396096 RUNX1Q01196 453 aa14.02□□□□□ -0.16
NUP50-202ENST00000396096 MEGF10Q96KG7 1140 aa14.02□□□□□ -0.16
NUP50-202ENST00000396096 SNX22Q96L94 193 aa14.02□□□□□ -0.16
NUP50-202ENST00000396096 SLC35B3Q9H1N7 401 aa14.02□□□□□ -0.16
NUP50-202ENST00000396096 HSPB7Q9UBY9 170 aa14.02□□□□□ -0.16
NUP50-202ENST00000396096 DUSP13Q9UII6 198 aa14.02□□□□□ -0.16
NUP50-202ENST00000396096 RAMP3O60896 148 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 IAPPP10997 89 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 CTRB1P17538 263 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 NFYBP25208 207 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 SSTR5P35346 364 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 BRWD1-AS2P59051 145 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 AKR1C8PQ5T2L2 129 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 CTRB2Q6GPI1 263 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 FAM53AQ6NSI3 398 aaPredicted RBP14.01□□□□□ -0.17
NUP50-202ENST00000396096 GCSAMQ8N6F7 178 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 ZNF525Q8N782 197 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 PPP1R35Q8TAP8 253 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 KCNJ16Q9NPI9 418 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 KIAA1456Q9P272 454 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 MED19A0JLT2 244 aaPredicted RBP14.01□□□□□ -0.17
NUP50-202ENST00000396096 MGST3O14880 152 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 PPIHO43447 177 aaKnown RBP14.01□□□□□ -0.17
NUP50-202ENST00000396096 LHBP01229 141 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 GZMHP20718 246 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 PAX6P26367 422 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 UBE2KP61086 200 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 HBG1P69891 147 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 HBG2P69892 147 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 FLI1Q01543 452 aaPredicted RBP14.01□□□□□ -0.17
NUP50-202ENST00000396096 TNFRSF9Q07011 255 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 HAPLN4Q86UW8 402 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 TPRX1Q8N7U7 411 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 HSD17B10Q99714 261 aaKnown RBP14.01□□□□□ -0.17
NUP50-202ENST00000396096 AGMATQ9BSE5 352 aa14.01□□□□□ -0.17
NUP50-202ENST00000396096 PSMG3Q9BT73 122 aaPredicted RBP14.01□□□□□ -0.17
NUP50-202ENST00000396096 TRAV1-1A0A0B4J248 108 aa14□□□□□ -0.17
NUP50-202ENST00000396096 H7C2Y5 167 aa14□□□□□ -0.17
NUP50-202ENST00000396096 CLDN14O95500 239 aa14□□□□□ -0.17
NUP50-202ENST00000396096 GATA4P43694 442 aa14□□□□□ -0.17
NUP50-202ENST00000396096 RPS23P62266 143 aaKnown RBP14□□□□□ -0.17
NUP50-202ENST00000396096 TLE4Q04727 773 aa14□□□□□ -0.17
NUP50-202ENST00000396096 ARL16Q0P5N6 197 aa14□□□□□ -0.17
NUP50-202ENST00000396096 ZNF808Q8N4W9 903 aaPredicted RBP14□□□□□ -0.17
NUP50-202ENST00000396096 TCTEX1D2Q8WW35 142 aa14□□□□□ -0.17
NUP50-202ENST00000396096 OR2V2Q96R30 315 aa14□□□□□ -0.17
NUP50-202ENST00000396096 NCOR1P1Q9H4R4 102 aa14□□□□□ -0.17
NUP50-202ENST00000396096 LAMP3Q9UQV4 416 aa14□□□□□ -0.17
NUP50-202ENST00000396096 SVILO95425 2214 aa14□□□□□ -0.17
NUP50-202ENST00000396096 PRRC2CQ9Y520 2896 aaKnown RBP14□□□□□ -0.17
NUP50-202ENST00000396096 ODAMA1E959 279 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 RBFOX3A6NFN3 312 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 C17orf98A8MV24 154 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 ATP6V1G2-DDX39BF2Z307 99 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 RAB29O14966 203 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 CLDN1O95832 211 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 HBE1P02100 147 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 METTL15P1P0C7V9 234 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 CCL20P78556 96 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 TMEM14EPQ6UXP3 125 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 THNSL2Q86YJ6 484 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 EDARADDQ8WWZ3 215 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 RBKSQ9H477 322 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 ESRP2Q9H6T0 727 aaKnown RBP13.99□□□□□ -0.17
NUP50-202ENST00000396096 SMCO4Q9NRQ5 59 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 JPT1Q9UK76 154 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 FBXO7Q9Y3I1 522 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 LRRC30A6NM36 301 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 A8MXE2 369 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 GPR37O15354 613 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 S1PR2O95136 353 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 LRRC75BQ2VPJ9 315 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 FAM180AQ6UWF9 173 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 SCGB1C1Q8TD33 95 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 RBMXL1Q96E39 390 aaKnown RBP13.99□□□□□ -0.17
NUP50-202ENST00000396096 DCTN5Q9BTE1 182 aa13.99□□□□□ -0.17
NUP50-202ENST00000396096 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.99□□□□□ -0.17
NUP50-202ENST00000396096 MKRN2OSH3BPM6 223 aa13.98□□□□□ -0.17
NUP50-202ENST00000396096 G6PCP35575 357 aa13.98□□□□□ -0.17
NUP50-202ENST00000396096 ZNF816Q0VGE8 651 aaPredicted RBP13.98□□□□□ -0.17
NUP50-202ENST00000396096 SPRNQ5BIV9 151 aa13.98□□□□□ -0.17
NUP50-202ENST00000396096 MOGAT3Q86VF5 341 aa13.98□□□□□ -0.17
NUP50-202ENST00000396096 RFESDQ8TAC1 157 aa13.98□□□□□ -0.17
NUP50-202ENST00000396096 FAM222BQ8WU58 562 aa13.98□□□□□ -0.17
NUP50-202ENST00000396096 PSG11Q9UQ72 335 aa13.98□□□□□ -0.17
NUP50-202ENST00000396096 SSUH2Q9Y2M2 353 aa13.98□□□□□ -0.17
NUP50-202ENST00000396096 LOC400499M0QZD8 3231 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 IGHV3-43A0A0B4J1X8 118 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 F2RL2O00254 374 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 YPEL1O60688 119 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 KRASP01116 189 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 IGHV3-43DP0DP04 118 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 EDDM3AQ14507 147 aa13.97□□□□□ -0.17
NUP50-202ENST00000396096 SLC25A24Q6NUK1 477 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms