RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 GTSCR1Q86UQ5 136 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 POM121Q96HA1 1249 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 KCNE5Q9UJ90 142 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 DLEC1Q9Y238 1755 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 PLXNA1Q9UIW2 1896 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 B9A039 149 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 RD3LP0DJH9 198 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 MALP21145 153 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 WNT5AP41221 380 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 SAPCD1Q5SSQ6 148 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 NSUN5P2Q63ZY6 315 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 ZNF645Q8N7E2 425 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 ZNF418Q8TF45 676 aaPredicted RBP6.5□□□□□ -1.37
SYNE2-205ENST00000394768 LSM10Q969L4 123 aaKnown RBP6.5□□□□□ -1.37
SYNE2-205ENST00000394768 PLPPR2Q96GM1 343 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 FAM53CQ9NYF3 392 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 LOC107984156A0A0G2JMH3 177 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 LIPFP07098 398 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 SLC16A13Q7RTY0 426 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 ARL17AQ8IVW1 177 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 TEX37Q96LM6 180 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 CMC4P56277 68 aaPredicted RBP6.5□□□□□ -1.37
SYNE2-205ENST00000394768 SGMS2Q8NHU3 365 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 CEACAM4O75871 244 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 PAX1P15863 534 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 CTSSP25774 331 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 ZNF345Q14585 488 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 C12orf73Q69YU5 71 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 HAPLN4Q86UW8 402 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 SMIM14Q96QK8 99 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 WIPI2Q9Y4P8 454 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 PATJQ8NI35 1801 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 FAM90A26D6RGX4 464 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 NPPCP23582 126 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 SH2D5Q6ZV89 423 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 FAM214BQ7L5A3 538 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 OLIG3Q7RTU3 272 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 WNT2BQ93097 391 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 VSTM2LQ96N03 204 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 IFT22Q9H7X7 185 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 TRAV34A0A0B4J273 112 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 KBTBD11O94819 623 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 SOD3P08294 240 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 CDKN2AP42771 156 aaKnown RBP6.5□□□□□ -1.37
SYNE2-205ENST00000394768 KLRB1Q12918 225 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 PRSS36Q5K4E3 855 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 KIR3DL3Q8N743 410 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 MRPL32Q9BYC8 188 aaKnown RBP6.5□□□□□ -1.37
SYNE2-205ENST00000394768 CACNA1GO43497 2377 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 IGLV3-16A0A075B6K0 115 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 LINC00862A6NCI5 91 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 PPM1DO15297 605 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 GLCCI1Q86VQ1 547 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 LRTM2Q8N967 370 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 SSMEM1Q8WWF3 244 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 TNFRSF18Q9Y5U5 241 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 H0Y980 276 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 STPG2Q8N412 459 aa6.5□□□□□ -1.37
SYNE2-205ENST00000394768 ZCCHC14Q8WYQ9 949 aaKnown RBP6.5□□□□□ -1.37
SYNE2-205ENST00000394768 ZNF430Q9H8G1 570 aaPredicted RBP6.5□□□□□ -1.37
SYNE2-205ENST00000394768 METTL1Q9UBP6 276 aaKnown RBP6.5□□□□□ -1.37
SYNE2-205ENST00000394768 SLC25A37Q9NYZ2 338 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 HSF4Q9ULV5 492 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 PDCD11Q14690 1871 aaKnown RBP6.49□□□□□ -1.37
SYNE2-205ENST00000394768 RPL36A-HNRNPH2H7BZ11 118 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 J3KRW8 73 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 ANOS1P23352 680 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 GZMKP49863 264 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 PGLYRP3Q96LB9 341 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 TNFSF18Q9UNG2 199 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 PRSS53Q2L4Q9 553 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 C2orf83Q53S99 150 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 ZNF385CQ66K41 422 aaPredicted RBP6.49□□□□□ -1.37
SYNE2-205ENST00000394768 UNQ5815/PRO19632Q6UWF5 114 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 LRRC75AQ8NAA5 344 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 LOC102723996A0A087X1L8 192 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 TMEM262E9PQX1 116 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 EGR1P18146 543 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 RAB32Q13637 225 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 DXOO77932 396 aaKnown RBP6.49□□□□□ -1.37
SYNE2-205ENST00000394768 GAPTQ8N292 157 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 TMEM186Q96B77 213 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 GUCD1Q96NT3 240 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 CHODLQ9H9P2 273 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 CISD1Q9NZ45 108 aaKnown RBP6.49□□□□□ -1.37
SYNE2-205ENST00000394768 DNLZQ5SXM8 178 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 SCMH1Q96GD3 660 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 THADAQ6YHU6 1953 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 A0A1B0GW15 77 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 CRPP02741 224 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 FGF8P55075 233 aaPredicted RBP6.49□□□□□ -1.37
SYNE2-205ENST00000394768 CX3CL1P78423 397 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 IBA57Q5T440 356 aaKnown RBP6.49□□□□□ -1.37
SYNE2-205ENST00000394768 STPG1Q5TH74 334 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 LEMD1Q68G75 181 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 TMEM136Q6ZRR5 245 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 CADM3Q8N126 398 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 IGHV3OR16-12A0A075B7B8 117 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 B4GALT3O60512 393 aa6.49□□□□□ -1.37
SYNE2-205ENST00000394768 ADRA2AP08913 450 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms