RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 TMEM182Q6ZP80 229 aaPredicted RBP11.93□□□□□ -0.5
MKS1-203ENST00000393120 SSX8Q7RTT4 187 aa11.93□□□□□ -0.5
MKS1-203ENST00000393120 NUP37Q8NFH4 326 aa11.93□□□□□ -0.5
MKS1-203ENST00000393120 FAM222BQ8WU58 562 aa11.93□□□□□ -0.5
MKS1-203ENST00000393120 HSD17B10Q99714 261 aaKnown RBP11.93□□□□□ -0.5
MKS1-203ENST00000393120 SMDT1Q9H4I9 107 aa11.93□□□□□ -0.5
MKS1-203ENST00000393120 BTBD17A6NE02 478 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 BRWD1-AS2P59051 145 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 DHRS7BQ6IAN0 325 aaPredicted RBP11.92□□□□□ -0.5
MKS1-203ENST00000393120 ALKBH2Q6NS38 261 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 MOGAT3Q86VF5 341 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 TMEM217Q8N7C4 229 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 TPRX1Q8N7U7 411 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 EDARADDQ8WWZ3 215 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 PSENENQ9NZ42 101 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 IL19Q9UHD0 177 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 JPT1Q9UK76 154 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 LAMP3Q9UQV4 416 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 TP53TG5Q9Y2B4 290 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 A0A0G2JNJ9 132 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 NUPL2O15504 423 aaKnown RBP11.92□□□□□ -0.5
MKS1-203ENST00000393120 RAMP3O60896 148 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 H2AFB1P0C5Y9 115 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 BMP5P22003 454 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 GUK1Q16774 197 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 SPRNQ5BIV9 151 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 SP5Q6BEB4 398 aaPredicted RBP11.92□□□□□ -0.5
MKS1-203ENST00000393120 FAM53AQ6NSI3 398 aaPredicted RBP11.92□□□□□ -0.5
MKS1-203ENST00000393120 C22orf34Q6ZV56 151 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 Q8NA96 180 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 FAM213BQ8TBF2 198 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 ITLN1Q8WWA0 313 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 PBDC1Q9BVG4 233 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 MRPL37Q9BZE1 423 aaKnown RBP11.92□□□□□ -0.5
MKS1-203ENST00000393120 HSPB7Q9UBY9 170 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 Q9UFV3 132 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 ZNF835Q9Y2P0 537 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 KPTNQ9Y664 436 aa11.92□□□□□ -0.5
MKS1-203ENST00000393120 C16orf97H3BN30 126 aa11.91□□□□□ -0.5
MKS1-203ENST00000393120 SPRY3O43610 288 aa11.91□□□□□ -0.5
MKS1-203ENST00000393120 YPEL1O60688 119 aa11.91□□□□□ -0.5
MKS1-203ENST00000393120 CLDN14O95500 239 aa11.91□□□□□ -0.5
MKS1-203ENST00000393120 CLDN1O95832 211 aa11.91□□□□□ -0.5
MKS1-203ENST00000393120 IFNA5P01569 189 aa11.91□□□□□ -0.5
MKS1-203ENST00000393120 UBE2KP61086 200 aa11.91□□□□□ -0.5
MKS1-203ENST00000393120 VHLLQ6RSH7 139 aa11.91□□□□□ -0.5
MKS1-203ENST00000393120 SPACA3Q8IXA5 215 aa11.91□□□□□ -0.5
MKS1-203ENST00000393120 CLRN3Q8NCR9 226 aa11.91□□□□□ -0.5
MKS1-203ENST00000393120 RFESDQ8TAC1 157 aa11.91□□□□□ -0.5
MKS1-203ENST00000393120 Q8TCH9 128 aa11.91□□□□□ -0.5
MKS1-203ENST00000393120 CD300LFQ8TDQ1 290 aa11.91□□□□□ -0.5
MKS1-203ENST00000393120 YPEL2Q96QA6 119 aa11.91□□□□□ -0.5
MKS1-203ENST00000393120 PARD6GQ9BYG4 376 aaPredicted RBP11.91□□□□□ -0.5
MKS1-203ENST00000393120 JKAMPQ9P055 326 aa11.91□□□□□ -0.5
MKS1-203ENST00000393120 PRR14LQ5THK1 2151 aa11.91□□□□□ -0.5
MKS1-203ENST00000393120 C17orf98A8MV24 154 aa11.9□□□□□ -0.5
MKS1-203ENST00000393120 F2RL2O00254 374 aa11.9□□□□□ -0.5
MKS1-203ENST00000393120 RAB29O14966 203 aa11.9□□□□□ -0.5
MKS1-203ENST00000393120 OR8U8P0C7N1 319 aa11.9□□□□□ -0.5
MKS1-203ENST00000393120 CGB3P0DN86 165 aa11.9□□□□□ -0.5
MKS1-203ENST00000393120 CGB7P0DN87 165 aa11.9□□□□□ -0.5
MKS1-203ENST00000393120 CCKARP32238 428 aa11.9□□□□□ -0.5
MKS1-203ENST00000393120 HBG1P69891 147 aa11.9□□□□□ -0.5
MKS1-203ENST00000393120 HBG2P69892 147 aa11.9□□□□□ -0.5
MKS1-203ENST00000393120 TNFRSF9Q07011 255 aa11.9□□□□□ -0.5
MKS1-203ENST00000393120 EDDM3AQ14507 147 aa11.9□□□□□ -0.5
MKS1-203ENST00000393120 TBR1Q16650 682 aa11.9□□□□□ -0.5
MKS1-203ENST00000393120 ZNF808Q8N4W9 903 aaPredicted RBP11.9□□□□□ -0.5
MKS1-203ENST00000393120 CISD2Q8N5K1 135 aaKnown RBP11.9□□□□□ -0.5
MKS1-203ENST00000393120 KDF1Q8NAX2 398 aaPredicted RBP11.9□□□□□ -0.5
MKS1-203ENST00000393120 TCTEX1D2Q8WW35 142 aa11.9□□□□□ -0.5
MKS1-203ENST00000393120 DCTN5Q9BTE1 182 aa11.9□□□□□ -0.5
MKS1-203ENST00000393120 KCNJ16Q9NPI9 418 aa11.9□□□□□ -0.5
MKS1-203ENST00000393120 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.9□□□□□ -0.5
MKS1-203ENST00000393120 OR6C3Q9NZP0 311 aa11.9□□□□□ -0.5
MKS1-203ENST00000393120 RNF7Q9UBF6 113 aa11.9□□□□□ -0.5
MKS1-203ENST00000393120 RIF1Q5UIP0 2472 aaKnown RBP11.9□□□□□ -0.5
MKS1-203ENST00000393120 LRRC30A6NM36 301 aa11.9□□□□□ -0.51
MKS1-203ENST00000393120 K7ENP7 123 aa11.9□□□□□ -0.51
MKS1-203ENST00000393120 ITGB1BP1O14713 200 aa11.9□□□□□ -0.51
MKS1-203ENST00000393120 IGHV1-46P01743 117 aa11.9□□□□□ -0.51
MKS1-203ENST00000393120 ATF4P18848 351 aaPredicted RBP11.9□□□□□ -0.51
MKS1-203ENST00000393120 PTAFRP25105 342 aa11.9□□□□□ -0.51
MKS1-203ENST00000393120 MORN2Q502X0 79 aa11.9□□□□□ -0.51
MKS1-203ENST00000393120 TMEM108Q6UXF1 575 aa11.9□□□□□ -0.51
MKS1-203ENST00000393120 ZNF561Q8N587 486 aa11.9□□□□□ -0.51
MKS1-203ENST00000393120 C14orf79Q96F83 325 aa11.9□□□□□ -0.51
MKS1-203ENST00000393120 SDSLQ96GA7 329 aa11.9□□□□□ -0.51
MKS1-203ENST00000393120 GCM1Q9NP62 436 aa11.9□□□□□ -0.51
MKS1-203ENST00000393120 RAB9BQ9NP90 201 aa11.9□□□□□ -0.51
MKS1-203ENST00000393120 PSG11Q9UQ72 335 aa11.9□□□□□ -0.51
MKS1-203ENST00000393120 GAB2Q9UQC2 676 aa11.9□□□□□ -0.51
MKS1-203ENST00000393120 ZFHX2Q9C0A1 2572 aaPredicted RBP11.89□□□□□ -0.51
MKS1-203ENST00000393120 LOC400499M0QZD8 3231 aa11.89□□□□□ -0.51
MKS1-203ENST00000393120 H3BP45 60 aa11.89□□□□□ -0.51
MKS1-203ENST00000393120 PPIHO43447 177 aaKnown RBP11.89□□□□□ -0.51
MKS1-203ENST00000393120 KRASP01116 189 aa11.89□□□□□ -0.51
MKS1-203ENST00000393120 IAPPP10997 89 aa11.89□□□□□ -0.51
MKS1-203ENST00000393120 TNFSF4P23510 183 aa11.89□□□□□ -0.51
MKS1-203ENST00000393120 NPBWR1P48145 328 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms