RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 C5orf30Q96GV9 206 aa12.47□□□□□ -0.41
MKS1-202ENST00000393119 MSGN1A6NI15 193 aa12.46□□□□□ -0.41
MKS1-202ENST00000393119 PGLYRP1O75594 196 aaPredicted RBP12.46□□□□□ -0.41
MKS1-202ENST00000393119 FCN3O75636 299 aa12.46□□□□□ -0.41
MKS1-202ENST00000393119 F12P00748 615 aaPredicted RBP12.46□□□□□ -0.41
MKS1-202ENST00000393119 ECI1P42126 302 aa12.46□□□□□ -0.41
MKS1-202ENST00000393119 S100A10P60903 97 aa12.46□□□□□ -0.41
MKS1-202ENST00000393119 BLOC1S1P78537 153 aa12.46□□□□□ -0.41
MKS1-202ENST00000393119 IAH1Q2TAA2 248 aaPredicted RBP12.46□□□□□ -0.41
MKS1-202ENST00000393119 SLC35E4Q6ICL7 350 aa12.46□□□□□ -0.41
MKS1-202ENST00000393119 CLEC9AQ6UXN8 241 aa12.46□□□□□ -0.41
MKS1-202ENST00000393119 SLC35G3Q8N808 338 aa12.46□□□□□ -0.41
MKS1-202ENST00000393119 OR52M1Q8NGK5 317 aa12.46□□□□□ -0.41
MKS1-202ENST00000393119 C2CD4CQ8TF44 421 aa12.46□□□□□ -0.41
MKS1-202ENST00000393119 LEAP2Q969E1 77 aa12.46□□□□□ -0.41
MKS1-202ENST00000393119 ARL11Q969Q4 196 aa12.46□□□□□ -0.41
MKS1-202ENST00000393119 MMP26Q9NRE1 261 aa12.46□□□□□ -0.41
MKS1-202ENST00000393119 CISD1Q9NZ45 108 aaKnown RBP12.46□□□□□ -0.41
MKS1-202ENST00000393119 RBM7Q9Y580 266 aaKnown RBP12.46□□□□□ -0.41
MKS1-202ENST00000393119 SPTAN1Q13813 2472 aaKnown RBP12.46□□□□□ -0.42
MKS1-202ENST00000393119 DYSFO75923 2080 aa12.46□□□□□ -0.42
MKS1-202ENST00000393119 LY6HO94772 140 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 SCGB1D2O95969 90 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 PSMB6P28072 239 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 GATA4P43694 442 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 TFF3Q07654 80 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 MZT1Q08AG7 82 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 ZNF600Q6ZNG1 722 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 CYTL1Q9NRR1 136 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 UQCC1Q9NVA1 299 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 COMMD9Q9P000 198 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 ZDHHC8Q9ULC8 765 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 KCNS2Q9ULS6 477 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 KCNIP3Q9Y2W7 256 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 CD3EP07766 207 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 CFHR2P36980 270 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 TMEM268Q5VZI3 342 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 IL34Q6ZMJ4 242 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 LIAT1Q6ZQX7 453 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 ZNF808Q8N4W9 903 aaPredicted RBP12.45□□□□□ -0.42
MKS1-202ENST00000393119 KCNJ16Q9NPI9 418 aa12.45□□□□□ -0.42
MKS1-202ENST00000393119 IFNL4K9M1U5 179 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 PRB1P04280 392 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 ZNF16P17020 682 aaPredicted RBP12.44□□□□□ -0.42
MKS1-202ENST00000393119 IL2RGP31785 369 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 IL15RAQ13261 267 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 OR2B11Q5JQS5 317 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 GALNT14Q96FL9 552 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 C18orf12Q96KH6 178 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 CNTNAP3BQ96NU0 1288 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 SAP30LQ9HAJ7 183 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 UTP20O75691 2785 aaKnown RBP12.44□□□□□ -0.42
MKS1-202ENST00000393119 A0A0B4J2A0 478 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 F5H0A9 414 aaPredicted RBP12.44□□□□□ -0.42
MKS1-202ENST00000393119 CTXN2P0C2S0 81 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 PLA2G5P39877 138 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 FBXL19-AS1Q494R0 122 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 BTNL3Q6UXE8 466 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 DCUN1D4Q92564 292 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 GALMQ96C23 342 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 ABHD14BQ96IU4 210 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 C2orf50Q96LR7 162 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 GAFA1Q96PS6 74 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 OR2S2Q9NQN1 319 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 KCNIP1Q9NZI2 227 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 SHPKQ9UHJ6 478 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 UBE2J1Q9Y385 318 aaPredicted RBP12.44□□□□□ -0.42
MKS1-202ENST00000393119 FLNCQ14315 2725 aa12.44□□□□□ -0.42
MKS1-202ENST00000393119 RAI1Q7Z5J4 1906 aaPredicted RBP12.43□□□□□ -0.42
MKS1-202ENST00000393119 A0A0G2JRQ6 117 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 A0A1W2PPE3 182 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 C15orf65H3BRN8 121 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 K7N7A8 449 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 TNFSF4P23510 183 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 PJVKQ0ZLH3 352 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 STUMQ69YW2 141 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 LYPD2Q6UXB3 125 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 RBMS3Q6XE24 437 aaKnown RBP12.43□□□□□ -0.42
MKS1-202ENST00000393119 ZFP82Q8N141 532 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 NMES1Q9C002 83 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 DYNLRB1Q9NP97 96 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 LSM5Q9Y4Y9 91 aaKnown RBP12.43□□□□□ -0.42
MKS1-202ENST00000393119 TRAV20A0A0B4J274 112 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 ODAMA1E959 279 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 OOEPA6NGQ2 149 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 ST8SIA5O15466 376 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 NFYBP25208 207 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 SLC16A13Q7RTY0 426 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 RNF141Q8WVD5 230 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 EDARADDQ8WWZ3 215 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 TMEM222Q9H0R3 208 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 OR51M1Q9H341 326 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 NGBQ9NPG2 151 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 ARFGEF3Q5TH69 2177 aa12.43□□□□□ -0.42
MKS1-202ENST00000393119 A0A1W2PPR1 153 aa12.42□□□□□ -0.42
MKS1-202ENST00000393119 C19orf84I3L1E1 186 aa12.42□□□□□ -0.42
MKS1-202ENST00000393119 TMPRSS2O15393 492 aa12.42□□□□□ -0.42
MKS1-202ENST00000393119 IGHV2-70P01814 119 aa12.42□□□□□ -0.42
MKS1-202ENST00000393119 TPT1P13693 172 aaKnown RBP12.42□□□□□ -0.42
MKS1-202ENST00000393119 LOXP28300 417 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms