RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 WRBO00258 174 aa16.7■□□□□ 0.26
PTPN11-202ENST00000392597 IRF2P14316 349 aa16.7■□□□□ 0.26
PTPN11-202ENST00000392597 ZNF16P17020 682 aaPredicted RBP16.7■□□□□ 0.26
PTPN11-202ENST00000392597 SULT1A2P50226 295 aa16.7■□□□□ 0.26
PTPN11-202ENST00000392597 AKR1C2P52895 323 aa16.7■□□□□ 0.26
PTPN11-202ENST00000392597 TEX36Q5VZQ5 186 aa16.7■□□□□ 0.26
PTPN11-202ENST00000392597 ZNF66Q6ZN08 573 aa16.7■□□□□ 0.26
PTPN11-202ENST00000392597 MARC2Q969Z3 335 aa16.7■□□□□ 0.26
PTPN11-202ENST00000392597 SMIM8Q96KF7 97 aa16.7■□□□□ 0.26
PTPN11-202ENST00000392597 FAM234AQ9H0X4 552 aa16.7■□□□□ 0.26
PTPN11-202ENST00000392597 ESRP2Q9H6T0 727 aaKnown RBP16.7■□□□□ 0.26
PTPN11-202ENST00000392597 RNF150Q9ULK6 438 aa16.7■□□□□ 0.26
PTPN11-202ENST00000392597 CHD6Q8TD26 2715 aa16.7■□□□□ 0.26
PTPN11-202ENST00000392597 IGKV1-5P01602 117 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 CAV2P51636 162 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 BAXQ07812 192 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 FBXL19-AS1Q494R0 122 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 FAM209AQ5JX71 171 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 UQCC3Q6UW78 93 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 OR1S2Q8NGQ3 325 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 RFESDQ8TAC1 157 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 BSCL2Q96G97 398 aaPredicted RBP16.69■□□□□ 0.26
PTPN11-202ENST00000392597 C5orf30Q96GV9 206 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 GINS3Q9BRX5 216 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 DCTN5Q9BTE1 182 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 WFDC1Q9HC57 220 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 DSCAMO60469 2012 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 KIAA1324LA8MWY0 1029 aaPredicted RBP16.69■□□□□ 0.26
PTPN11-202ENST00000392597 TEX46H3BTG2 121 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 YPEL1O60688 119 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 EPHA1P21709 976 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 NHLH2Q02577 135 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 YPEL2Q96QA6 119 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 RAB40CQ96S21 281 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 HSD17B10Q99714 261 aaKnown RBP16.69■□□□□ 0.26
PTPN11-202ENST00000392597 AGMATQ9BSE5 352 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 MAGT1Q9H0U3 335 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 COA4Q9NYJ1 87 aa16.69■□□□□ 0.26
PTPN11-202ENST00000392597 USF3Q68DE3 2245 aa16.68■□□□□ 0.26
PTPN11-202ENST00000392597 IGSF23A1L1A6 192 aa16.68■□□□□ 0.26
PTPN11-202ENST00000392597 FAM24AA6NFZ4 105 aa16.68■□□□□ 0.26
PTPN11-202ENST00000392597 LRRC30A6NM36 301 aa16.68■□□□□ 0.26
PTPN11-202ENST00000392597 ZNF705EA8MWA4 302 aaPredicted RBP16.68■□□□□ 0.26
PTPN11-202ENST00000392597 B8ZZF3 427 aa16.68■□□□□ 0.26
PTPN11-202ENST00000392597 CHST1O43916 411 aa16.68■□□□□ 0.26
PTPN11-202ENST00000392597 ATG12O94817 140 aa16.68■□□□□ 0.26
PTPN11-202ENST00000392597 CYB5R3P00387 301 aaPredicted RBP16.68■□□□□ 0.26
PTPN11-202ENST00000392597 SEC11BP0C7V7 166 aa16.68■□□□□ 0.26
PTPN11-202ENST00000392597 FAM201AQ5SY85 155 aa16.68■□□□□ 0.26
PTPN11-202ENST00000392597 NCMAPQ5T1S8 102 aa16.68■□□□□ 0.26
PTPN11-202ENST00000392597 TMEM252Q8N6L7 170 aa16.68■□□□□ 0.26
PTPN11-202ENST00000392597 EGLN1Q9GZT9 426 aa16.68■□□□□ 0.26
PTPN11-202ENST00000392597 ZNF665Q9H7R5 613 aa16.68■□□□□ 0.26
PTPN11-202ENST00000392597 CACNG5Q9UF02 275 aa16.68■□□□□ 0.26
PTPN11-202ENST00000392597 MMP24Q9Y5R2 645 aa16.68■□□□□ 0.26
PTPN11-202ENST00000392597 DYSFO75923 2080 aa16.68■□□□□ 0.26
PTPN11-202ENST00000392597 RELNP78509 3460 aa16.68■□□□□ 0.26
PTPN11-202ENST00000392597 CGB3P0DN86 165 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 CGB7P0DN87 165 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 LPAR6P43657 344 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 EDDM3BP56851 147 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 FAM53AQ6NSI3 398 aaPredicted RBP16.67■□□□□ 0.26
PTPN11-202ENST00000392597 ADAM5Q6NVV9 412 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 CLEC9AQ6UXN8 241 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 ZNF788Q6ZQV5 615 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 Q6ZRM9 215 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 LINC00052Q96N35 136 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 GAFA1Q96PS6 74 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 GNG12Q9UBI6 72 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 IGHV3-43A0A0B4J1X8 118 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 FAM90A26D6RGX4 464 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 ITGB1BP1O14713 200 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 TMEM50AO95807 157 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 PRB1P04280 392 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 IGHV3-43DP0DP04 118 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 CHRNB4P30926 498 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 RPL30P62888 115 aaKnown RBP16.67■□□□□ 0.26
PTPN11-202ENST00000392597 BLOC1S1P78537 153 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 ZNF266Q14584 549 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 MORN2Q502X0 79 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 FGFRL1Q8N441 504 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 ZNF843Q8N446 348 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 ZNF808Q8N4W9 903 aaPredicted RBP16.67■□□□□ 0.26
PTPN11-202ENST00000392597 MMP26Q9NRE1 261 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 CALYQ9NYX4 217 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 NUP50Q9UKX7 468 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 PSG11Q9UQ72 335 aa16.67■□□□□ 0.26
PTPN11-202ENST00000392597 DSCAML1Q8TD84 2053 aa16.66■□□□□ 0.26
PTPN11-202ENST00000392597 SHISA9B4DS77 424 aa16.66■□□□□ 0.26
PTPN11-202ENST00000392597 CLDN1O95832 211 aa16.66■□□□□ 0.26
PTPN11-202ENST00000392597 SPP1P10451 314 aa16.66■□□□□ 0.26
PTPN11-202ENST00000392597 CCL8P80075 99 aa16.66■□□□□ 0.26
PTPN11-202ENST00000392597 IL34Q6ZMJ4 242 aa16.66■□□□□ 0.26
PTPN11-202ENST00000392597 STPG2Q8N412 459 aa16.66■□□□□ 0.26
PTPN11-202ENST00000392597 LAMP3Q9UQV4 416 aa16.66■□□□□ 0.26
PTPN11-202ENST00000392597 WSB1Q9Y6I7 421 aa16.66■□□□□ 0.26
PTPN11-202ENST00000392597 SIGLEC5O15389 551 aa16.65■□□□□ 0.26
PTPN11-202ENST00000392597 FBXO24O75426 580 aa16.65■□□□□ 0.26
PTPN11-202ENST00000392597 C1QL1O75973 258 aa16.65■□□□□ 0.26
PTPN11-202ENST00000392597 PAX9P55771 341 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms