RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 TEX30Q5JUR7 227 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 MIEN1Q9BRT3 115 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 BEX4Q9NWD9 120 aaPredicted RBP14.03□□□□□ -0.16
SHANK1-204ENST00000391814 SCTP09683 121 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 TRGV5A0A0B4J1U4 118 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 TRBV9A0A0B4J1U6 114 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 HPRT1P00492 218 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 GLRX5Q86SX6 157 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 POC1AQ8NBT0 407 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 WFDC6Q9BQY6 131 aa14.03□□□□□ -0.16
SHANK1-204ENST00000391814 SYNGR1O43759 233 aa14.02□□□□□ -0.16
SHANK1-204ENST00000391814 AMMECR1LQ6DCA0 310 aa14.02□□□□□ -0.16
SHANK1-204ENST00000391814 GPR146Q96CH1 333 aa14.02□□□□□ -0.16
SHANK1-204ENST00000391814 GLRX2Q9NS18 164 aa14.02□□□□□ -0.16
SHANK1-204ENST00000391814 A0A1W2PPC4 97 aa14.02□□□□□ -0.16
SHANK1-204ENST00000391814 NUBP1P53384 320 aa14.02□□□□□ -0.16
SHANK1-204ENST00000391814 C2orf68Q2NKX9 166 aa14.02□□□□□ -0.16
SHANK1-204ENST00000391814 KCNS1Q96KK3 526 aa14.02□□□□□ -0.16
SHANK1-204ENST00000391814 OR8B2Q96RD0 313 aa14.02□□□□□ -0.16
SHANK1-204ENST00000391814 R4GN57 208 aa14.02□□□□□ -0.16
SHANK1-204ENST00000391814 J3QR06 171 aa14.02□□□□□ -0.17
SHANK1-204ENST00000391814 FSTP19883 344 aa14.02□□□□□ -0.17
SHANK1-204ENST00000391814 TM4SF4P48230 202 aa14.02□□□□□ -0.17
SHANK1-204ENST00000391814 MAJINQ3KP22 176 aa14.02□□□□□ -0.17
SHANK1-204ENST00000391814 PRSS27Q9BQR3 290 aa14.02□□□□□ -0.17
SHANK1-204ENST00000391814 NPVFQ9HCQ7 196 aa14.02□□□□□ -0.17
SHANK1-204ENST00000391814 EAF1Q96JC9 268 aaPredicted RBP14.02□□□□□ -0.17
SHANK1-204ENST00000391814 DSPPQ9NZW4 1301 aa14.02□□□□□ -0.17
SHANK1-204ENST00000391814 CD200R1LQ6Q8B3 271 aa14.02□□□□□ -0.17
SHANK1-204ENST00000391814 CELA2BP08218 269 aaPredicted RBP14.01□□□□□ -0.17
SHANK1-204ENST00000391814 GALNT14Q96FL9 552 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 KCNMB2Q9Y691 235 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 IGKV3D-15A0A087WSY6 115 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 AGFG2O95081 481 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 IGKV3-15P01624 115 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 TMEM196Q5HYL7 178 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 OR2I1PQ8NGU4 316 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 URB1O60287 2271 aaKnown RBP14.01□□□□□ -0.17
SHANK1-204ENST00000391814 TMPRSS2O15393 492 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 PLAUP00749 431 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 OR5R1Q8NH85 324 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 MBD3L1Q8WWY6 194 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 MBD1Q9UIS9 605 aaPredicted RBP14.01□□□□□ -0.17
SHANK1-204ENST00000391814 OR8G5Q8NG78 346 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 MRGPRX3Q96LB0 322 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 LILRA5A6NI73 299 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 RAMP1O60894 148 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 PGLYRP1O75594 196 aaPredicted RBP14.01□□□□□ -0.17
SHANK1-204ENST00000391814 CD8AP01732 235 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 LGALS3P17931 250 aaKnown RBP14.01□□□□□ -0.17
SHANK1-204ENST00000391814 LIMS1P48059 325 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 TMEM177Q53S58 311 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 MMD2Q8IY49 270 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 ZBTB34Q8NCN2 500 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 WDYHV1Q96HA8 205 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 ABHD14BQ96IU4 210 aa14.01□□□□□ -0.17
SHANK1-204ENST00000391814 OR4A8P0C604 315 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 ZNF645Q8N7E2 425 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 OR10AG1Q8NH19 301 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 VSTM2AQ8TAG5 236 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 GMPPAQ96IJ6 420 aaPredicted RBP14□□□□□ -0.17
SHANK1-204ENST00000391814 HARBI1Q96MB7 349 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 RTN4RQ9BZR6 473 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 A0A1W2PQD3 144 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 TBX6O95947 436 aaPredicted RBP14□□□□□ -0.17
SHANK1-204ENST00000391814 IZUMO4Q1ZYL8 232 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 MAP1LC3AQ9H492 121 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 CRYBB3P26998 211 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 FBLN7Q53RD9 439 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 RHBDD2Q6NTF9 364 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 UBE2CO00762 179 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 EGR1P18146 543 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 PRSS53Q2L4Q9 553 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 TM4SF20Q53R12 229 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 GCSAMLQ5JQS6 135 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 STXBP6Q8NFX7 210 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 FNDC4Q9H6D8 234 aaPredicted RBP14□□□□□ -0.17
SHANK1-204ENST00000391814 THYN1Q9P016 225 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 SPCS1Q9Y6A9 102 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 ZNHIT1O43257 154 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 IGKV1D-16P01601 117 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 TNFSF10P50591 281 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 JKAMPQ9P055 326 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 LY75O60449 1722 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 SPTY2D1-AS1A0A0U1RR47 76 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 RPS11P62280 158 aaKnown RBP eCLIP14□□□□□ -0.17
SHANK1-204ENST00000391814 RELQ04864 619 aaPredicted RBP14□□□□□ -0.17
SHANK1-204ENST00000391814 AMELYQ99218 206 aa14□□□□□ -0.17
SHANK1-204ENST00000391814 MRPL16Q9NX20 251 aaKnown RBP14□□□□□ -0.17
SHANK1-204ENST00000391814 TGFAP01135 160 aa13.99□□□□□ -0.17
SHANK1-204ENST00000391814 TMEM187Q14656 261 aa13.99□□□□□ -0.17
SHANK1-204ENST00000391814 FAM169BQ8N8A8 192 aa13.99□□□□□ -0.17
SHANK1-204ENST00000391814 ZNF764Q96H86 408 aaPredicted RBP13.99□□□□□ -0.17
SHANK1-204ENST00000391814 WISP3O95389 354 aaPredicted RBP13.99□□□□□ -0.17
SHANK1-204ENST00000391814 ZNF735P0CB33 412 aa13.99□□□□□ -0.17
SHANK1-204ENST00000391814 ISXQ2M1V0 245 aa13.99□□□□□ -0.17
SHANK1-204ENST00000391814 RABAC1Q9UI14 185 aa13.99□□□□□ -0.17
SHANK1-204ENST00000391814 GCM2O75603 506 aaPredicted RBP13.99□□□□□ -0.17
SHANK1-204ENST00000391814 PRSS8Q16651 343 aa13.99□□□□□ -0.17
SHANK1-204ENST00000391814 MOGAT3Q86VF5 341 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms