RNA–Protein interactions for RNA: ENST00000390496.1

TRAJ41-201, Transcript of T cell receptor alpha joining 41, humanhuman

APPRIS P1 BASIC

Gene TRAJ41, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ41-201ENST00000390496 CDC34P49427 236 aaPredicted RBP0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 TSPEAR-AS2P59090 65 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 PPP1R1AQ13522 171 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 PDK2Q15119 407 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 CST6Q15828 149 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 MAPK14Q16539 360 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 MRPL51Q4U2R6 128 aaKnown RBP0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 SDHAF4Q5VUM1 108 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 LCN8Q6JVE9 175 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 DNM1P34Q6PK57 102 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 SDIM1Q6ZPB5 146 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 KRTAP5-2Q701N4 177 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 SLC13A5Q86YT5 568 aaPredicted RBP0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 ZBTB8OSQ8IWT0 167 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 FAM9CQ8IZT9 166 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 TMEM251Q8N6I4 163 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 OR10D3Q8NH80 312 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 OR5K1Q8NHB7 308 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 SLC37A2Q8TED4 501 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 RNASE6Q93091 150 aaKnown RBP0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 ABHD14BQ96IU4 210 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 TBX5Q99593 518 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 UPK3BQ9BT76 320 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 ZNF426Q9BUY5 554 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 METTL9Q9H1A3 318 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 C11orf1Q9H5F2 150 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 PARVAQ9NVD7 372 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 PLEKHJ1Q9NW61 149 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 FAM206AQ9NX38 181 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 GLS2Q9UI32 602 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 MCTS1Q9ULC4 181 aaKnown RBP0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 CCL26Q9Y258 94 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 ZNF337Q9Y3M9 751 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 HEY1Q9Y5J3 304 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 ATP6V1DQ9Y5K8 247 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 ADGRB3O60242 1522 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 NUP153P49790 1475 aaKnown RBP0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 SPATA31E1Q6ZUB1 1445 aa0.72□□□□□ -2.29
TRAJ41-201ENST00000390496 FBN1P35555 2871 aaKnown RBP0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 VWDEQ8N2E2 1590 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 SORL1Q92673 2214 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 C17orf51A8MQB3 221 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 A8MWP6 167 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 ODF3BA8MYP8 253 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 M0R381 172 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 CCRL2O00421 344 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 LIN7AO14910 233 aaPredicted RBP0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 CETN3O15182 167 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 SLC31A1O15431 190 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 HPGDSO60760 199 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 LY6HO94772 140 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 IGLV3-27P01718 113 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 HBZP02008 142 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 TYMSP04818 313 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 CCL3P10147 92 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 COX5BP10606 129 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 CBR1P16152 277 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 CSRP1P21291 193 aaKnown RBP0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 F8A1P23610 371 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 BLVRBP30043 206 aaPredicted RBP0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 FUSP35637 526 aaKnown RBP eCLIP0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 IFNGR2P38484 337 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 GABRA4P48169 554 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 GZMMP51124 257 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 BLVRAP53004 296 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 FGF12P61328 243 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 PYCR3Q53H96 274 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 TMEM31Q5JXX7 168 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 CDKL4Q5MAI5 379 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 LGALS9CQ6DKI2 356 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 KRTAP5-7Q6L8G8 165 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 RASL11AQ6T310 242 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 SPATA12Q7Z6I5 190 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 DNAAF3Q8N9W5 541 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 OR11H1Q8NG94 326 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 OR52E4Q8NGH9 312 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 CMTM2Q8TAZ6 248 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 DTD1Q8TEA8 209 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 SMIM12Q96EX1 92 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 DCUN1D5Q9BTE7 237 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 MED18Q9BUE0 208 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 PARD6GQ9BYG4 376 aaPredicted RBP0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 SLC22A4Q9H015 551 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 MED28Q9H204 178 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 DNAJC12Q9UKB3 198 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 HDGFL3Q9Y3E1 203 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 AMMECR1Q9Y4X0 333 aaPredicted RBP0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 FREM1Q5H8C1 2179 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 BAHCC1Q9P281 2608 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 DICER1Q9UPY3 1922 aaKnown RBP0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 NPATQ14207 1427 aa0.71□□□□□ -2.3
TRAJ41-201ENST00000390496 FN1P02751 2386 aaKnown RBP0.7□□□□□ -2.3
TRAJ41-201ENST00000390496 COL4A2P08572 1712 aa0.7□□□□□ -2.3
TRAJ41-201ENST00000390496 HEATR5BQ9P2D3 2071 aa0.7□□□□□ -2.3
TRAJ41-201ENST00000390496 IGHV3-73A0A0B4J1V6 119 aa0.7□□□□□ -2.3
TRAJ41-201ENST00000390496 A0A0J9YX75 114 aa0.7□□□□□ -2.3
TRAJ41-201ENST00000390496 PSCAO43653 123 aa0.7□□□□□ -2.3
TRAJ41-201ENST00000390496 STK16O75716 305 aa0.7□□□□□ -2.3
TRAJ41-201ENST00000390496 HLA-DRAP01903 254 aa0.7□□□□□ -2.3
TRAJ41-201ENST00000390496 TPM3P06753 285 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms