RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 PARD6AQ9NPB6 346 aa12.86□□□□□ -0.35
SNPH-202ENST00000381873 KLK13Q9UKR3 277 aa12.86□□□□□ -0.35
SNPH-202ENST00000381873 IGHV3-72A0A0B4J1Y9 119 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 CXorf1O96002 111 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 COX5BP10606 129 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 CRISP2P16562 243 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 PRSS53Q2L4Q9 553 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 MMD2Q8IY49 270 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 SCMH1Q96GD3 660 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 LHFPL6Q9Y693 200 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 CACNA1DQ01668 2161 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 ODAMA1E959 279 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 TMEM218A2RU14 115 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 IGF2P01344 180 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 ISG15P05161 165 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 IGSF11Q5DX21 431 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 PPP1R3EQ9H7J1 279 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 PARP11Q9NR21 331 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 MDC1Q14676 2089 aaKnown RBP12.85□□□□□ -0.35
SNPH-202ENST00000381873 POLEQ07864 2286 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 ID1P41134 155 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 ERVS71-1P61550 626 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 IGLV3-21P80748 117 aaPredicted RBP12.85□□□□□ -0.35
SNPH-202ENST00000381873 HIST3H3Q16695 136 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 ANAPC16Q96DE5 110 aa12.85□□□□□ -0.35
SNPH-202ENST00000381873 ZNHIT1O43257 154 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 ATP6V0CP27449 155 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 ZNF273Q14593 569 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 LRRC75BQ2VPJ9 315 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 FDX2Q6P4F2 183 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 SNRNP40Q96DI7 357 aaKnown RBP12.84□□□□□ -0.35
SNPH-202ENST00000381873 PDE6DO43924 150 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 IGKV3-11P04433 115 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 PF4V1P10720 104 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 CD1BP29016 333 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 SLC35B1P78383 322 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 TMEM255AQ5JRV8 349 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 C1orf100Q5SVJ3 147 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 ZNF552Q9H707 407 aaPredicted RBP12.84□□□□□ -0.35
SNPH-202ENST00000381873 CHODLQ9H9P2 273 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 LOC101059948A0A1B0GTJ6 334 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 TIAF1O95411 115 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 MELTFP08582 738 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 G0S2P27469 103 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 DHRS7CA6NNS2 312 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 CDK2AP1O14519 115 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 SYNGR3O43761 229 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 HLA-DQB1P01920 261 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 FAM74A3Q4VXF1 159 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 GTF2H5Q6ZYL4 71 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 OR11H7Q8NGC8 314 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 KLF14Q8TD94 323 aaPredicted RBP12.84□□□□□ -0.35
SNPH-202ENST00000381873 TET1Q8NFU7 2136 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 CACNA1BQ00975 2339 aa12.84□□□□□ -0.35
SNPH-202ENST00000381873 SCTP09683 121 aa12.83□□□□□ -0.35
SNPH-202ENST00000381873 WNT5AP41221 380 aa12.83□□□□□ -0.35
SNPH-202ENST00000381873 SELENOTP62341 195 aa12.83□□□□□ -0.35
SNPH-202ENST00000381873 KHDC3LQ587J8 217 aa12.83□□□□□ -0.35
SNPH-202ENST00000381873 AWAT1Q58HT5 328 aa12.83□□□□□ -0.35
SNPH-202ENST00000381873 FHL5Q5TD97 284 aa12.83□□□□□ -0.35
SNPH-202ENST00000381873 FDCSPQ8NFU4 85 aa12.83□□□□□ -0.35
SNPH-202ENST00000381873 OR4A5Q8NH83 315 aa12.83□□□□□ -0.35
SNPH-202ENST00000381873 VWCEQ96DN2 955 aa12.83□□□□□ -0.35
SNPH-202ENST00000381873 PITPNC1Q9UKF7 332 aa12.83□□□□□ -0.35
SNPH-202ENST00000381873 HIGD1AQ9Y241 93 aa12.83□□□□□ -0.35
SNPH-202ENST00000381873 GPR179Q6PRD1 2367 aa12.83□□□□□ -0.35
SNPH-202ENST00000381873 MFSD2BA6NFX1 497 aa12.83□□□□□ -0.36
SNPH-202ENST00000381873 CORTO00230 105 aa12.83□□□□□ -0.36
SNPH-202ENST00000381873 WFDC6Q9BQY6 131 aa12.83□□□□□ -0.36
SNPH-202ENST00000381873 DSPPQ9NZW4 1301 aa12.83□□□□□ -0.36
SNPH-202ENST00000381873 CACNA1HO95180 2353 aa12.83□□□□□ -0.36
SNPH-202ENST00000381873 B4DEV8 164 aa12.83□□□□□ -0.36
SNPH-202ENST00000381873 ATP5J2P56134 94 aa12.83□□□□□ -0.36
SNPH-202ENST00000381873 SERF2P84101 59 aa12.83□□□□□ -0.36
SNPH-202ENST00000381873 PMS2P11Q13670 270 aa12.83□□□□□ -0.36
SNPH-202ENST00000381873 CEBPEQ15744 281 aa12.83□□□□□ -0.36
SNPH-202ENST00000381873 MRPL30Q8TCC3 161 aaKnown RBP12.83□□□□□ -0.36
SNPH-202ENST00000381873 TMEM229AB2RXF0 380 aa12.83□□□□□ -0.36
SNPH-202ENST00000381873 RPL8P62917 257 aaKnown RBP12.83□□□□□ -0.36
SNPH-202ENST00000381873 PRDM14Q9GZV8 571 aa12.83□□□□□ -0.36
SNPH-202ENST00000381873 DLL3Q9NYJ7 618 aa12.83□□□□□ -0.36
SNPH-202ENST00000381873 SCNM1Q9BWG6 230 aa12.82□□□□□ -0.36
SNPH-202ENST00000381873 LYRM2Q9NU23 88 aaPredicted RBP12.82□□□□□ -0.36
SNPH-202ENST00000381873 H0Y980 276 aa12.82□□□□□ -0.36
SNPH-202ENST00000381873 SNRPEP62304 92 aaKnown RBP12.82□□□□□ -0.36
SNPH-202ENST00000381873 KLRB1Q12918 225 aa12.82□□□□□ -0.36
SNPH-202ENST00000381873 TIMP4Q99727 224 aa12.82□□□□□ -0.36
SNPH-202ENST00000381873 CALYQ9NYX4 217 aa12.82□□□□□ -0.36
SNPH-202ENST00000381873 FOXJ2Q9P0K8 574 aa12.82□□□□□ -0.36
SNPH-202ENST00000381873 SRSF10O75494 262 aaKnown RBP12.82□□□□□ -0.36
SNPH-202ENST00000381873 RPL7P18124 248 aaKnown RBP12.82□□□□□ -0.36
SNPH-202ENST00000381873 LRRC75AQ8NAA5 344 aa12.82□□□□□ -0.36
SNPH-202ENST00000381873 PAXXQ9BUH6 204 aa12.82□□□□□ -0.36
SNPH-202ENST00000381873 COL6A6A6NMZ7 2263 aa12.82□□□□□ -0.36
SNPH-202ENST00000381873 C7orf66A4D0T2 115 aa12.82□□□□□ -0.36
SNPH-202ENST00000381873 FAM74A7A6NL05 159 aa12.82□□□□□ -0.36
SNPH-202ENST00000381873 CEACAM18A8MTB9 384 aa12.82□□□□□ -0.36
SNPH-202ENST00000381873 SMPD2O60906 423 aa12.82□□□□□ -0.36
SNPH-202ENST00000381873 MRPL54Q6P161 138 aaKnown RBP12.82□□□□□ -0.36
SNPH-202ENST00000381873 C16orf82Q7Z2V1 217 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms