RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 TRAV34A0A0B4J273 112 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 ZNF816-ZNF321PA0A0X1KG74 233 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 OR6C6A6NF89 314 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 SH2D1BO14796 132 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 DHHO43323 396 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 NDUFB4O95168 129 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 PATE4P0C8F1 98 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 ESDP10768 282 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 HNF1AP20823 631 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 Q6ZS49 121 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 BAGE3Q86Y29 109 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 BAGE2Q86Y30 109 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 LAMTOR2Q9Y2Q5 125 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 EXPH5Q8NEV8 1989 aa12.72□□□□□ -0.37
CTNS-202ENST00000381870 LOC105371242A0A075B767 164 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 IGHV4-34P06331 123 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 CD99P14209 185 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 PTGDSP41222 190 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 ATP5G3P48201 142 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 FUT6P51993 359 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 UBE2G2P60604 165 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 TMEM92Q6UXU6 159 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 Q6ZN92 141 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 OR10G3Q8NGC4 313 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 OR4B1Q8NGF8 309 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 OR5P3Q8WZ94 311 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 TMEM54Q969K7 222 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 SFRP2Q96HF1 295 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 BTF3L4Q96K17 158 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 TIMM9Q9Y5J7 89 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 DIRC3C9JPN6 131 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 K7EP13 123 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 BCL3P20749 454 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 UNQ5815/PRO19632Q6UWF5 114 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 RABEPKQ7Z6M1 372 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 OR6C1Q96RD1 312 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 TXN2Q99757 166 aa12.71□□□□□ -0.37
CTNS-202ENST00000381870 ALKBH7Q9BT30 221 aaPredicted RBP12.71□□□□□ -0.37
CTNS-202ENST00000381870 MRPL18Q9H0U6 180 aaKnown RBP12.71□□□□□ -0.37
CTNS-202ENST00000381870 ZNF552Q9H707 407 aaPredicted RBP12.71□□□□□ -0.37
CTNS-202ENST00000381870 HYPMO75409 117 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 FRMD6-AS1P0C7T7 363 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 RPS16P62249 146 aaKnown RBP12.7□□□□□ -0.38
CTNS-202ENST00000381870 UBE2V1Q13404 147 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 PCSK4Q6UW60 755 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 FOXL2NBQ6ZUU3 175 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 PSMF1Q92530 271 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 METTL7AQ9H8H3 244 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 FER1L5A0AVI2 2057 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 LAMA1P25391 3075 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 EPOPA6NHQ4 379 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 SYNGR3O43761 229 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 CBR3O75828 277 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 THBS3P49746 956 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 SUMO1P63165 101 aaKnown RBP12.7□□□□□ -0.38
CTNS-202ENST00000381870 TFF3Q07654 80 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 FAM69BQ5VUD6 431 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 C20orf204Q6ZNR8 217 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 C1orf174Q8IYL3 243 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 GPR27Q9NS67 375 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 UQCR10Q9UDW1 63 aa12.7□□□□□ -0.38
CTNS-202ENST00000381870 ERRFI1Q9UJM3 462 aaPredicted RBP12.7□□□□□ -0.38
CTNS-202ENST00000381870 TRAV39A0A0B4J263 110 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 LOC102725191A0A1B0GVB3 256 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 TMPRSS2O15393 492 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 IGLC2P0DOY2 106 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 IGLC3P0DOY3 106 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 HNRNPA3P51991 378 aaKnown RBP12.69□□□□□ -0.38
CTNS-202ENST00000381870 PSG4Q00888 419 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 SGCZQ96LD1 299 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 UCN2Q96RP3 112 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 ZNF703Q9H7S9 590 aaPredicted RBP12.69□□□□□ -0.38
CTNS-202ENST00000381870 ATP23Q9Y6H3 246 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 TRBV20OR9-2A0A075B6H5 130 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 SYNGR4O95473 234 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 CLDN1O95832 211 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 KRASP01116 189 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 ZNF16P17020 682 aaPredicted RBP12.69□□□□□ -0.38
CTNS-202ENST00000381870 FASLGP48023 281 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 BLKP51451 505 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 RHBDD2Q6NTF9 364 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 TMPRSS7Q7RTY8 843 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 SIGLECL1Q8N7X8 197 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 CADM4Q8NFZ8 388 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 OR2M3Q8NG83 312 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 LSM10Q969L4 123 aaKnown RBP12.69□□□□□ -0.38
CTNS-202ENST00000381870 APH1AQ96BI3 265 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 RNF2Q99496 336 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 ULBP2Q9BZM5 246 aa12.69□□□□□ -0.38
CTNS-202ENST00000381870 ZNF407Q9C0G0 2248 aa12.68□□□□□ -0.38
CTNS-202ENST00000381870 MDFIC2A0A1B0GVS7 189 aa12.68□□□□□ -0.38
CTNS-202ENST00000381870 NXPH2O95156 264 aa12.68□□□□□ -0.38
CTNS-202ENST00000381870 KITLGP21583 273 aa12.68□□□□□ -0.38
CTNS-202ENST00000381870 S100GP29377 79 aa12.68□□□□□ -0.38
CTNS-202ENST00000381870 HINT1P49773 126 aaPredicted RBP12.68□□□□□ -0.38
CTNS-202ENST00000381870 ATP6V1FQ16864 119 aa12.68□□□□□ -0.38
CTNS-202ENST00000381870 ZNF324BQ6AW86 544 aaPredicted RBP12.68□□□□□ -0.38
CTNS-202ENST00000381870 OR1F12Q8NHA8 337 aa12.68□□□□□ -0.38
CTNS-202ENST00000381870 STARD4Q96DR4 205 aa12.68□□□□□ -0.38
CTNS-202ENST00000381870 PPP1R3CQ9UQK1 317 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms