RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 TRBV6-7A0A0A0MS04 114 aa12.98□□□□□ -0.33
SNRPB-201ENST00000381342 CHST1O43916 411 aa12.98□□□□□ -0.33
SNRPB-201ENST00000381342 HLA-DQB1P01920 261 aa12.98□□□□□ -0.33
SNRPB-201ENST00000381342 SAA2P0DJI9 122 aaPredicted RBP12.98□□□□□ -0.33
SNRPB-201ENST00000381342 OR3A3P47888 321 aa12.98□□□□□ -0.33
SNRPB-201ENST00000381342 CCBE1Q6UXH8 406 aaPredicted RBP12.98□□□□□ -0.33
SNRPB-201ENST00000381342 HOGA1Q86XE5 327 aa12.98□□□□□ -0.33
SNRPB-201ENST00000381342 OR8H3Q8N146 312 aa12.98□□□□□ -0.33
SNRPB-201ENST00000381342 DRAM1Q8N682 238 aa12.98□□□□□ -0.33
SNRPB-201ENST00000381342 BEST4Q8NFU0 473 aa12.98□□□□□ -0.33
SNRPB-201ENST00000381342 OR10J5Q8NHC4 309 aa12.98□□□□□ -0.33
SNRPB-201ENST00000381342 MCFD2Q8NI22 146 aa12.98□□□□□ -0.33
SNRPB-201ENST00000381342 CFHR4Q92496 578 aa12.98□□□□□ -0.33
SNRPB-201ENST00000381342 SNAPC3Q92966 411 aa12.98□□□□□ -0.33
SNRPB-201ENST00000381342 GINS4Q9BRT9 223 aa12.98□□□□□ -0.33
SNRPB-201ENST00000381342 C11orf54Q9H0W9 315 aaPredicted RBP12.98□□□□□ -0.33
SNRPB-201ENST00000381342 IFT46Q9NQC8 304 aa12.98□□□□□ -0.33
SNRPB-201ENST00000381342 PTTG2Q9NZH5 202 aa12.98□□□□□ -0.33
SNRPB-201ENST00000381342 MMP24Q9Y5R2 645 aa12.98□□□□□ -0.33
SNRPB-201ENST00000381342 IGHV1-3A0A0C4DH29 117 aa12.97□□□□□ -0.33
SNRPB-201ENST00000381342 A6NDX4 124 aa12.97□□□□□ -0.33
SNRPB-201ENST00000381342 NDUFA7O95182 113 aa12.97□□□□□ -0.33
SNRPB-201ENST00000381342 DIRAS3O95661 229 aa12.97□□□□□ -0.33
SNRPB-201ENST00000381342 GAPDHP04406 335 aaKnown RBP12.97□□□□□ -0.33
SNRPB-201ENST00000381342 MDKP21741 143 aaPredicted RBP12.97□□□□□ -0.33
SNRPB-201ENST00000381342 BRS3P32247 399 aa12.97□□□□□ -0.33
SNRPB-201ENST00000381342 PRSS3P35030 304 aa12.97□□□□□ -0.33
SNRPB-201ENST00000381342 CBX5P45973 191 aa12.97□□□□□ -0.33
SNRPB-201ENST00000381342 RNASE12Q5GAN4 147 aaKnown RBP12.97□□□□□ -0.33
SNRPB-201ENST00000381342 DHRS7BQ6IAN0 325 aaPredicted RBP12.97□□□□□ -0.33
SNRPB-201ENST00000381342 CNIH2Q6PI25 160 aa12.97□□□□□ -0.33
SNRPB-201ENST00000381342 TGIF2LXQ8IUE1 241 aa12.97□□□□□ -0.33
SNRPB-201ENST00000381342 EDARADDQ8WWZ3 215 aa12.97□□□□□ -0.33
SNRPB-201ENST00000381342 ABHD14BQ96IU4 210 aa12.97□□□□□ -0.33
SNRPB-201ENST00000381342 C1RLQ9NZP8 487 aa12.97□□□□□ -0.33
SNRPB-201ENST00000381342 ANXA10Q9UJ72 324 aa12.97□□□□□ -0.33
SNRPB-201ENST00000381342 IGHV3-72A0A0B4J1Y9 119 aa12.96□□□□□ -0.33
SNRPB-201ENST00000381342 CLPSL1A2RUU4 121 aa12.96□□□□□ -0.33
SNRPB-201ENST00000381342 LANCL1O43813 399 aa12.96□□□□□ -0.33
SNRPB-201ENST00000381342 LPLP06858 475 aa12.96□□□□□ -0.33
SNRPB-201ENST00000381342 SNRNP70P08621 437 aaKnown RBP12.96□□□□□ -0.33
SNRPB-201ENST00000381342 ARPC4P59998 168 aa12.96□□□□□ -0.33
SNRPB-201ENST00000381342 RELBQ01201 579 aa12.96□□□□□ -0.33
SNRPB-201ENST00000381342 RPL39P5Q59GN2 51 aa12.96□□□□□ -0.33
SNRPB-201ENST00000381342 MOB3BQ86TA1 216 aa12.96□□□□□ -0.33
SNRPB-201ENST00000381342 CAPSLQ8WWF8 208 aa12.96□□□□□ -0.33
SNRPB-201ENST00000381342 RBMXL1Q96E39 390 aaKnown RBP12.96□□□□□ -0.33
SNRPB-201ENST00000381342 MRPL20Q9BYC9 149 aaKnown RBP12.96□□□□□ -0.33
SNRPB-201ENST00000381342 NXF2Q9GZY0 626 aaKnown RBP12.96□□□□□ -0.33
SNRPB-201ENST00000381342 TOLLIPQ9H0E2 274 aa12.96□□□□□ -0.33
SNRPB-201ENST00000381342 ADAM30Q9UKF2 790 aa12.96□□□□□ -0.33
SNRPB-201ENST00000381342 PITPNC1Q9UKF7 332 aa12.96□□□□□ -0.33
SNRPB-201ENST00000381342 ANAPC10Q9UM13 185 aa12.96□□□□□ -0.33
SNRPB-201ENST00000381342 FBN3Q75N90 2809 aa12.95□□□□□ -0.34
SNRPB-201ENST00000381342 ITGB1BP1O14713 200 aa12.95□□□□□ -0.34
SNRPB-201ENST00000381342 TXNL1O43396 289 aa12.95□□□□□ -0.34
SNRPB-201ENST00000381342 LIAT1Q6ZQX7 453 aa12.95□□□□□ -0.34
SNRPB-201ENST00000381342 ZNF833PQ6ZTB9 187 aa12.95□□□□□ -0.34
SNRPB-201ENST00000381342 H1FOOQ8IZA3 346 aaPredicted RBP12.95□□□□□ -0.34
SNRPB-201ENST00000381342 GPX8Q8TED1 209 aa12.95□□□□□ -0.34
SNRPB-201ENST00000381342 AGMATQ9BSE5 352 aa12.95□□□□□ -0.34
SNRPB-201ENST00000381342 RNF150Q9ULK6 438 aa12.95□□□□□ -0.34
SNRPB-201ENST00000381342 RAB29O14966 203 aa12.94□□□□□ -0.34
SNRPB-201ENST00000381342 OR8U9P0C7N5 309 aa12.94□□□□□ -0.34
SNRPB-201ENST00000381342 NFYAP23511 347 aaPredicted RBP12.94□□□□□ -0.34
SNRPB-201ENST00000381342 GPR12P47775 334 aa12.94□□□□□ -0.34
SNRPB-201ENST00000381342 HES1Q14469 280 aa12.94□□□□□ -0.34
SNRPB-201ENST00000381342 HABP2Q14520 560 aaPredicted RBP12.94□□□□□ -0.34
SNRPB-201ENST00000381342 OR8U1Q8NH10 309 aa12.94□□□□□ -0.34
SNRPB-201ENST00000381342 ZNF251Q9BRH9 671 aa12.94□□□□□ -0.34
SNRPB-201ENST00000381342 OR2D2Q9H210 308 aa12.94□□□□□ -0.34
SNRPB-201ENST00000381342 PIPOXQ9P0Z9 390 aa12.94□□□□□ -0.34
SNRPB-201ENST00000381342 RNF114Q9Y508 228 aa12.94□□□□□ -0.34
SNRPB-201ENST00000381342 FAM90A9PA6NNJ1 464 aa12.93□□□□□ -0.34
SNRPB-201ENST00000381342 ZNF736B4DX44 427 aaPredicted RBP12.93□□□□□ -0.34
SNRPB-201ENST00000381342 J3QRK9 145 aa12.93□□□□□ -0.34
SNRPB-201ENST00000381342 IGKV1D-33P01593 117 aa12.93□□□□□ -0.34
SNRPB-201ENST00000381342 IGKV1-33P01594 117 aa12.93□□□□□ -0.34
SNRPB-201ENST00000381342 CTXN2P0C2S0 81 aa12.93□□□□□ -0.34
SNRPB-201ENST00000381342 LSAMPQ13449 338 aa12.93□□□□□ -0.34
SNRPB-201ENST00000381342 FAM71F2Q6NXP2 309 aa12.93□□□□□ -0.34
SNRPB-201ENST00000381342 DIRAS2Q96HU8 199 aa12.93□□□□□ -0.34
SNRPB-201ENST00000381342 ABHD1Q96SE0 405 aa12.93□□□□□ -0.34
SNRPB-201ENST00000381342 S1PR3Q99500 378 aa12.93□□□□□ -0.34
SNRPB-201ENST00000381342 NABP2Q9BQ15 211 aa12.93□□□□□ -0.34
SNRPB-201ENST00000381342 SLC25A33Q9BSK2 321 aa12.93□□□□□ -0.34
SNRPB-201ENST00000381342 SCPEP1Q9HB40 452 aa12.93□□□□□ -0.34
SNRPB-201ENST00000381342 RAB18Q9NP72 206 aa12.93□□□□□ -0.34
SNRPB-201ENST00000381342 NECAP2Q9NVZ3 263 aa12.93□□□□□ -0.34
SNRPB-201ENST00000381342 ZNF221Q9UK13 617 aa12.93□□□□□ -0.34
SNRPB-201ENST00000381342 RBM7Q9Y580 266 aaKnown RBP12.93□□□□□ -0.34
SNRPB-201ENST00000381342 FAM106CPP0CH98 169 aa12.92□□□□□ -0.34
SNRPB-201ENST00000381342 TMEM11P17152 192 aa12.92□□□□□ -0.34
SNRPB-201ENST00000381342 NAT1P18440 290 aa12.92□□□□□ -0.34
SNRPB-201ENST00000381342 HNF4GQ14541 408 aa12.92□□□□□ -0.34
SNRPB-201ENST00000381342 CDK10Q15131 360 aa12.92□□□□□ -0.34
SNRPB-201ENST00000381342 Q6ZSV7 163 aa12.92□□□□□ -0.34
SNRPB-201ENST00000381342 OR5AP2Q8NGF4 316 aa12.92□□□□□ -0.34
SNRPB-201ENST00000381342 OR52I2Q8NH67 350 aa12.92□□□□□ -0.34
SNRPB-201ENST00000381342 C5orf30Q96GV9 206 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms