RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 WDYHV1Q96HA8 205 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 SPXQ9BT56 116 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 DHHO43323 396 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 TMEM50AO95807 157 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 SIGLEC11Q96RL6 698 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 CCDC88AQ3V6T2 1871 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 TRAV9-2A0A087WT02 112 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 CEACAM5P06731 702 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 CTSDP07339 412 aaPredicted RBP9.43□□□□□ -0.9
CLCN4-202ENST00000380833 DCAF12L2Q5VW00 463 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 ARIH2OSQ8N7S6 290 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 TMEM106BQ9NUM4 274 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 FAM157CP0CG43 387 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 COL8A1P27658 744 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 MRGPREQ86SM8 312 aa9.43□□□□□ -0.9
CLCN4-202ENST00000380833 C19orf53Q9UNZ5 99 aaPredicted RBP9.43□□□□□ -0.9
CLCN4-202ENST00000380833 NDUFC2O95298 119 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 GAGE5Q13069 117 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 GAGE6Q13070 117 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 RAB1CQ92928 201 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 SLC25A37Q9NYZ2 338 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 COLQQ9Y215 455 aaPredicted RBP9.42□□□□□ -0.9
CLCN4-202ENST00000380833 AKAP12Q02952 1782 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 TMEM30CPA0ZSE6 113 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 FRG2CA6NGY1 282 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 J3QR06 171 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 UPK1AO00322 258 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 LANCL1O43813 399 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 YBX1P67809 324 aaKnown RBP9.42□□□□□ -0.9
CLCN4-202ENST00000380833 INSL4Q14641 139 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 SMIM20Q8N5G0 67 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 PRR13Q9NZ81 148 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 ERRFI1Q9UJM3 462 aaPredicted RBP9.42□□□□□ -0.9
CLCN4-202ENST00000380833 A0A1W2PRX2 142 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 PPICP45877 212 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 B4GALNT1Q00973 533 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 MRPS16Q9Y3D3 137 aaKnown RBP9.42□□□□□ -0.9
CLCN4-202ENST00000380833 ARFGEF2Q9Y6D5 1785 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 COL16A1Q07092 1604 aaPredicted RBP9.42□□□□□ -0.9
CLCN4-202ENST00000380833 TARM1B6A8C7 271 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 H0YIG0 161 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 CHST1O43916 411 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 LGALS3P17931 250 aaKnown RBP9.42□□□□□ -0.9
CLCN4-202ENST00000380833 SPANXDQ9BXN6 97 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 VSIG4Q9Y279 399 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 DHRS3O75911 302 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 DNAL4O96015 105 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 IGHV2-70P01814 119 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 CLDN10P78369 228 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 TMEM211Q6ICI0 200 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 C1QL4Q86Z23 238 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 FAM219AQ8IW50 185 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 APOBEC4Q8WW27 367 aaKnown RBP9.42□□□□□ -0.9
CLCN4-202ENST00000380833 PTX4Q96A99 478 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 LHX9Q9NQ69 397 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 SEMA5BQ9P283 1151 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 IGHV3-72A0A0B4J1Y9 119 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 RAMP3O60896 148 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 COL9A1P20849 921 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 PPP1CCP36873 323 aaKnown RBP9.42□□□□□ -0.9
CLCN4-202ENST00000380833 RND3P61587 244 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 Q8WTZ3 238 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.42□□□□□ -0.9
CLCN4-202ENST00000380833 SIRT5Q9NXA8 310 aa9.42□□□□□ -0.9
CLCN4-202ENST00000380833 HIST1H2BKO60814 126 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 ETHE1O95571 254 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 HIST1H2BJP06899 126 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 HIST1H2BOP23527 126 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 HIST1H2BBP33778 126 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 GFRA1P56159 465 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 HIST1H2BDP58876 126 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 HIST1H2BCP62807 126 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 TRA2AQ13595 282 aaKnown RBP eCLIP9.41□□□□□ -0.9
CLCN4-202ENST00000380833 HIST2H2BEQ16778 126 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.41□□□□□ -0.9
CLCN4-202ENST00000380833 KIRREL2Q6UWL6 708 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 TMEM170AQ8WVE7 144 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 HIST1H2BHQ93079 126 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 GRAMD2BQ96HH9 432 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 HIST1H2BNQ99877 126 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 HIST1H2BMQ99879 126 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 TXNDC17Q9BRA2 123 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 SHPRHQ149N8 1683 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 ATP5LO75964 103 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 IGKV3-20P01619 116 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 MEF2BQ02080 365 aaPredicted RBP9.41□□□□□ -0.9
CLCN4-202ENST00000380833 PDPNQ86YL7 162 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 LAMTOR1Q6IAA8 161 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 SNAI2O43623 268 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 TMEM171Q8WVE6 324 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 DIRC2Q96SL1 478 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 S1PR5Q9H228 398 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 A0A0G2JLM5 398 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 RRN3P1Q2M238 152 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 FER1L6Q2WGJ9 1857 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 DOT1LQ8TEK3 1739 aa9.41□□□□□ -0.9
CLCN4-202ENST00000380833 RCC1LQ96I51 464 aaKnown RBP9.41□□□□□ -0.9
CLCN4-202ENST00000380833 A0A1B0GTH9 108 aa9.4□□□□□ -0.9
CLCN4-202ENST00000380833 ZNF324O75467 553 aaPredicted RBP9.4□□□□□ -0.9
CLCN4-202ENST00000380833 ZNF32P17041 273 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms