RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 RNASE4P34096 147 aaKnown RBP10.81□□□□□ -0.68
CHD3-203ENST00000380358 SIGLEC14Q08ET2 396 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 IL13RA2Q14627 380 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 C17orf47Q8NEP4 570 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 GMPPAQ96IJ6 420 aaPredicted RBP10.81□□□□□ -0.68
CHD3-203ENST00000380358 PHIPQ8WWQ0 1821 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 TRAV1-2A0A0B4J238 106 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 SNRPD3P62318 126 aaKnown RBP10.81□□□□□ -0.68
CHD3-203ENST00000380358 FAM89BQ8N5H3 189 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 TRPM6Q9BX84 2022 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 IGF2P01344 180 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 PDLIM4P50479 330 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 KIAA1644Q3SXP7 199 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 NXT2Q9NPJ8 142 aaKnown RBP10.81□□□□□ -0.68
CHD3-203ENST00000380358 PPIAL4CA0A0B4J2A2 164 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 CDK2AP2O75956 126 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 LINC00869P0C866 280 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 PRR35P0CG20 571 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 PPIAL4GP0DN37 164 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 RCC1P18754 421 aaPredicted RBP10.81□□□□□ -0.68
CHD3-203ENST00000380358 IL11P20809 199 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 TMEM50BP56557 158 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 RAE1P78406 368 aaKnown RBP10.81□□□□□ -0.68
CHD3-203ENST00000380358 SMIM4Q8WVI0 70 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 TMEM30AQ9NV96 361 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 TRGV3P03979 118 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 IL4P05112 153 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 CD69Q07108 199 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 SLC52A3Q9NQ40 469 aa10.81□□□□□ -0.68
CHD3-203ENST00000380358 CD1AP06126 327 aa10.8□□□□□ -0.68
CHD3-203ENST00000380358 ALG14Q96F25 216 aa10.8□□□□□ -0.68
CHD3-203ENST00000380358 GZMHP20718 246 aa10.8□□□□□ -0.68
CHD3-203ENST00000380358 FAM3BP58499 235 aaPredicted RBP10.8□□□□□ -0.68
CHD3-203ENST00000380358 SNAI3Q3KNW1 292 aa10.8□□□□□ -0.68
CHD3-203ENST00000380358 NRN1LQ496H8 165 aa10.8□□□□□ -0.68
CHD3-203ENST00000380358 SPATA45Q537H7 98 aa10.8□□□□□ -0.68
CHD3-203ENST00000380358 DCAF10Q5QP82 559 aa10.8□□□□□ -0.68
CHD3-203ENST00000380358 CFAP161Q6P656 301 aa10.8□□□□□ -0.68
CHD3-203ENST00000380358 CBLN2Q8IUK8 224 aa10.8□□□□□ -0.68
CHD3-203ENST00000380358 TMEFF2Q9UIK5 374 aaPredicted RBP10.8□□□□□ -0.68
CHD3-203ENST00000380358 PSCAO43653 123 aa10.8□□□□□ -0.68
CHD3-203ENST00000380358 PPYP01298 95 aa10.8□□□□□ -0.68
CHD3-203ENST00000380358 LHX2P50458 406 aa10.8□□□□□ -0.68
CHD3-203ENST00000380358 PNKDQ8N490 385 aa10.8□□□□□ -0.68
CHD3-203ENST00000380358 OR2Y1Q8NGV0 311 aa10.8□□□□□ -0.68
CHD3-203ENST00000380358 TNFRSF18Q9Y5U5 241 aa10.8□□□□□ -0.68
CHD3-203ENST00000380358 ANAPC16Q96DE5 110 aa10.8□□□□□ -0.68
CHD3-203ENST00000380358 OPN4Q9UHM6 478 aa10.8□□□□□ -0.68
CHD3-203ENST00000380358 LSM10Q969L4 123 aaKnown RBP10.8□□□□□ -0.68
CHD3-203ENST00000380358 PXMP4Q9Y6I8 212 aa10.8□□□□□ -0.68
CHD3-203ENST00000380358 ZNFX1Q9P2E3 1918 aaKnown RBP10.8□□□□□ -0.68
CHD3-203ENST00000380358 NPC2P61916 151 aa10.79□□□□□ -0.68
CHD3-203ENST00000380358 PQLC2Q6ZP29 291 aa10.79□□□□□ -0.68
CHD3-203ENST00000380358 RAB33BQ9H082 229 aa10.79□□□□□ -0.68
CHD3-203ENST00000380358 DOT1LQ8TEK3 1739 aa10.79□□□□□ -0.68
CHD3-203ENST00000380358 TRAV8-6A0A0B4J262 113 aa10.79□□□□□ -0.68
CHD3-203ENST00000380358 PGLYRP3Q96LB9 341 aa10.79□□□□□ -0.68
CHD3-203ENST00000380358 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.79□□□□□ -0.68
CHD3-203ENST00000380358 RUNX1Q01196 453 aa10.79□□□□□ -0.68
CHD3-203ENST00000380358 OR4D5Q8NGN0 318 aa10.79□□□□□ -0.68
CHD3-203ENST00000380358 GPBAR1Q8TDU6 330 aa10.79□□□□□ -0.68
CHD3-203ENST00000380358 ZNF385AQ96PM9 386 aaKnown RBP10.79□□□□□ -0.68
CHD3-203ENST00000380358 ZNF506Q5JVG8 444 aa10.79□□□□□ -0.68
CHD3-203ENST00000380358 ZNF770Q6IQ21 691 aaPredicted RBP10.79□□□□□ -0.68
CHD3-203ENST00000380358 NDUFB4O95168 129 aa10.79□□□□□ -0.68
CHD3-203ENST00000380358 GAB4Q2WGN9 574 aa10.79□□□□□ -0.68
CHD3-203ENST00000380358 ERASQ7Z444 233 aa10.79□□□□□ -0.68
CHD3-203ENST00000380358 SPSB4Q96A44 273 aa10.79□□□□□ -0.68
CHD3-203ENST00000380358 MAP1LC3AQ9H492 121 aa10.79□□□□□ -0.68
CHD3-203ENST00000380358 FABP2P12104 132 aa10.79□□□□□ -0.68
CHD3-203ENST00000380358 LINC00615Q96LM1 132 aaPredicted RBP10.79□□□□□ -0.68
CHD3-203ENST00000380358 VAX2Q9UIW0 290 aa10.79□□□□□ -0.68
CHD3-203ENST00000380358 A0A0U1RQV5 110 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 EWSR1Q01844 656 aaKnown RBP eCLIP10.78□□□□□ -0.68
CHD3-203ENST00000380358 IL24Q13007 206 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 MRGPRGQ86SM5 289 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 NDUFB6O95139 128 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 IGHV4-39P01824 125 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 RSPO4Q2I0M5 234 aaPredicted RBP10.78□□□□□ -0.68
CHD3-203ENST00000380358 IGSF11Q5DX21 431 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 FAM209BQ5JX69 171 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 HSPB9Q9BQS6 159 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 MON2Q7Z3U7 1717 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 PIK3C2AO00443 1686 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 RTTNQ86VV8 2226 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 HBZP02008 142 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 ERGP11308 486 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 LIFP15018 202 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 MOSP00540 346 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 SMIM18P0DKX4 95 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 FBXW9Q5XUX1 488 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 PRSS54Q6PEW0 395 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 RBKSQ9H477 322 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 VIRMAQ69YN4 1812 aaKnown RBP10.78□□□□□ -0.68
CHD3-203ENST00000380358 NUP188Q5SRE5 1749 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 BIVMQ86UB2 503 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 MRPS16Q9Y3D3 137 aaKnown RBP10.78□□□□□ -0.68
CHD3-203ENST00000380358 PIKFYVEQ9Y2I7 2098 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 CHAC2Q8WUX2 184 aa10.78□□□□□ -0.68
CHD3-203ENST00000380358 FGF20Q9NP95 211 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms