RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 RIPPLY3P57055 190 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 AKR1C1Q04828 323 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 PSG7Q13046 419 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 RAB32Q13637 225 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 PRR30Q53SZ7 412 aaPredicted RBP9.18□□□□□ -0.94
NEDD9-201ENST00000379433 C20orf204Q6ZNR8 217 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 Q6ZPA2 131 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 CBLN2Q8IUK8 224 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 SGPP2Q8IWX5 399 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 OR51H1Q8NH63 302 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 RBMXL1Q96E39 390 aaKnown RBP9.18□□□□□ -0.94
NEDD9-201ENST00000379433 SNHG12Q9BXW3 62 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 NECAP2Q9NVZ3 263 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 ACACBO00763 2458 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 KANTRA0A1W2PQU2 76 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 M0QZ24 198 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 GLP1RP43220 463 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 TDGF1P3P51864 188 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 RBPJQ06330 500 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 TMEM42Q69YG0 159 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 WFDC8Q8IUA0 241 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 ZDHHC22Q8N966 263 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 SYT3Q9BQG1 590 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 TM2D1Q9BX74 207 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 PKIBQ9C010 78 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 OR5AC2Q9NZP5 309 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 PROCRQ9UNN8 238 aa9.18□□□□□ -0.94
NEDD9-201ENST00000379433 PTPRBP23467 1997 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 A0A1B0GV50 99 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 MED19A0JLT2 244 aaPredicted RBP9.17□□□□□ -0.94
NEDD9-201ENST00000379433 RPL36A-HNRNPH2H7BZ11 118 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 DEGS1O15121 323 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 IFNA5P01569 189 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 S100GP29377 79 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 PPT1P50897 306 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 FAM27E3Q08E93 113 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 ACSF3Q4G176 576 aaPredicted RBP9.17□□□□□ -0.94
NEDD9-201ENST00000379433 C11orf87Q6NUJ2 197 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 KLF14Q8TD94 323 aaPredicted RBP9.17□□□□□ -0.94
NEDD9-201ENST00000379433 MRPL24Q96A35 216 aaKnown RBP9.17□□□□□ -0.94
NEDD9-201ENST00000379433 C10orf35Q96D05 121 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 FAM110AQ9BQ89 295 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 CLCF1Q9UBD9 225 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 FBLN5Q9UBX5 448 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 RNF150Q9ULK6 438 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 NKX6-3A6NJ46 265 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 IL2RAP01589 272 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 PET100P0DJ07 73 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 EPHA1P21709 976 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 FPR2P25090 351 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 CEACAM6P40199 344 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 GNG3P63215 75 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 EDDM3AQ14507 147 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 GABRA6Q16445 453 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 IZUMO4Q1ZYL8 232 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 Q6ZT83 130 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 LYZL2Q7Z4W2 148 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 SUMF2Q8NBJ7 301 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 RFESDQ8TAC1 157 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 KIRREL1Q96J84 757 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 WNK2Q9Y3S1 2297 aa9.17□□□□□ -0.94
NEDD9-201ENST00000379433 MSGN1A6NI15 193 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 AQP7O14520 342 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 SFT2D2O95562 160 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 CECR9P0C854 216 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 KLF3P57682 345 aaPredicted RBP9.16□□□□□ -0.94
NEDD9-201ENST00000379433 ZNF154Q13106 437 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 VAX1Q5SQQ9 334 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 SAMD13Q5VXD3 122 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 C19orf35Q6ZS72 473 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 LRP11Q86VZ4 500 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 RXFP4Q8TDU9 374 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 PEF1Q9UBV8 284 aaKnown RBP9.16□□□□□ -0.94
NEDD9-201ENST00000379433 KCNS2Q9ULS6 477 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 K7EP13 123 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 PHOX2AO14813 284 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 RAMP3O60896 148 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 AESQ08117 197 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 ZCCHC24Q8N2G6 241 aaKnown RBP9.16□□□□□ -0.94
NEDD9-201ENST00000379433 SCCPDHQ8NBX0 429 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 OR2Z1Q8NG97 314 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 OR5P3Q8WZ94 311 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 SLC2A9Q9NRM0 540 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 SLC2A8Q9NY64 477 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 TRAPPC2LQ9UL33 140 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 ZDHHC8Q9ULC8 765 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 OSGIN2Q9Y236 505 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 OMGP23515 440 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 PDLIM3Q53GG5 364 aaPredicted RBP9.16□□□□□ -0.94
NEDD9-201ENST00000379433 FAM201AQ5SY85 155 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 WDR86Q86TI4 376 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 DEFB108BQ8NET1 73 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 DKK4Q9UBT3 224 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 ZNF391Q9UJN7 358 aa9.16□□□□□ -0.94
NEDD9-201ENST00000379433 ZNF705EA8MWA4 302 aaPredicted RBP9.15□□□□□ -0.94
NEDD9-201ENST00000379433 MFAP4P55083 255 aa9.15□□□□□ -0.94
NEDD9-201ENST00000379433 BEND2Q8NDZ0 799 aa9.15□□□□□ -0.94
NEDD9-201ENST00000379433 ABCA1O95477 2261 aa9.15□□□□□ -0.94
NEDD9-201ENST00000379433 FOXI3A8MTJ6 420 aaPredicted RBP9.15□□□□□ -0.94
NEDD9-201ENST00000379433 DEFB108AA8MXU0 73 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms