RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 HIKESHIQ53FT3 197 aa11.62□□□□□ -0.55
HIPK3-202ENST00000379016 OR2Y1Q8NGV0 311 aa11.62□□□□□ -0.55
HIPK3-202ENST00000379016 H3BQ15 152 aa11.62□□□□□ -0.55
HIPK3-202ENST00000379016 CTSVO60911 334 aa11.62□□□□□ -0.55
HIPK3-202ENST00000379016 TMEM42Q69YG0 159 aa11.62□□□□□ -0.55
HIPK3-202ENST00000379016 PQLC2Q6ZP29 291 aa11.62□□□□□ -0.55
HIPK3-202ENST00000379016 C15orf39Q6ZRI6 1047 aa11.62□□□□□ -0.55
HIPK3-202ENST00000379016 TEX29Q8N6K0 151 aa11.62□□□□□ -0.55
HIPK3-202ENST00000379016 KCNK17Q96T54 332 aa11.62□□□□□ -0.55
HIPK3-202ENST00000379016 SLC25A2Q9BXI2 301 aa11.62□□□□□ -0.55
HIPK3-202ENST00000379016 TEX101Q9BY14 249 aa11.62□□□□□ -0.55
HIPK3-202ENST00000379016 MAP1BP46821 2468 aaKnown RBP11.61□□□□□ -0.55
HIPK3-202ENST00000379016 TMEM250H0YL14 139 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 MAGEA5P43359 124 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 LEMD1Q68G75 181 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 ZBTB34Q8NCN2 500 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 SHISA4Q96DD7 197 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 ELF5Q9UKW6 265 aaPredicted RBP11.61□□□□□ -0.55
HIPK3-202ENST00000379016 SPCS1Q9Y6A9 102 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 MUC21A0A0G2JKD1 596 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 MUC21A0A140T8X8 626 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 LHBP01229 141 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 IGHV3-48P01763 117 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 RNASE4P34096 147 aaKnown RBP11.61□□□□□ -0.55
HIPK3-202ENST00000379016 MUC21Q5SSG8 566 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 LAMTOR3Q9UHA4 124 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 TCF24Q7RTU0 167 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 MRGPRX3Q96LB0 322 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 K7N7A8 449 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 CDCA4Q9BXL8 241 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 ANKRD20A5PA0PJZ0 165 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 PCP4P48539 62 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 CLDN10P78369 228 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 SLC25A34Q6PIV7 304 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 CCL28Q9NRJ3 127 aa11.61□□□□□ -0.55
HIPK3-202ENST00000379016 PPIAL4EA0A075B759 164 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 PPIAL4DF5H284 164 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 ATP5LO75964 103 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 AMY1AP04745 511 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 PPIAL4FP0DN26 164 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 FOLR2P14207 255 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 HOXA5P20719 270 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 ANAPC13Q9BS18 74 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 PDLIM7Q9NR12 457 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 PPIAL4AQ9Y536 164 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 ZFC3H1O60293 1989 aaKnown RBP11.6□□□□□ -0.55
HIPK3-202ENST00000379016 MRC1P22897 1456 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 NWD2Q9ULI1 1742 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 PRRT4C9JH25 899 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 C16orf97H3BN30 126 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 HLA-DRB1P01911 266 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 KLKB1P03952 638 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 FGF5P12034 268 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 CD69Q07108 199 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 OR10S1Q8NGN2 331 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 CTSDP07339 412 aaPredicted RBP11.6□□□□□ -0.55
HIPK3-202ENST00000379016 NRN1LQ496H8 165 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 CBLN2Q8IUK8 224 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 PTP4A1Q93096 173 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 RCC2Q9P258 522 aaKnown RBP11.6□□□□□ -0.55
HIPK3-202ENST00000379016 TRAV1-2A0A0B4J238 106 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 ARRDC5A6NEK1 342 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 FAM74A7A6NL05 159 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 EIF3GO75821 320 aaKnown RBP eCLIP11.6□□□□□ -0.55
HIPK3-202ENST00000379016 NDUFB4O95168 129 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 RPL27AP46776 148 aaKnown RBP11.6□□□□□ -0.55
HIPK3-202ENST00000379016 PAPPA-AS1Q5QFB9 102 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 PXMP4Q9Y6I8 212 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 KIAA2026Q5HYC2 2103 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 A0A1B0GTH9 108 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 PIGYQ3MUY2 71 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 KIAA1644Q3SXP7 199 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 FAM219BQ5XKK7 198 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 Q6ZSR9 355 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 VSTM2LQ96N03 204 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 DOCK8Q8NF50 2099 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 GGTLC3B5MD39 225 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 LINC00869P0C866 280 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 LHFPL4Q7Z7J7 247 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 STHQ8IWL8 128 aa11.6□□□□□ -0.55
HIPK3-202ENST00000379016 MRPL18Q9H0U6 180 aaKnown RBP11.6□□□□□ -0.55
HIPK3-202ENST00000379016 ANKRD26Q9UPS8 1709 aa11.59□□□□□ -0.55
HIPK3-202ENST00000379016 ZIC3O60481 467 aa11.59□□□□□ -0.55
HIPK3-202ENST00000379016 NT5CQ8TCD5 201 aa11.59□□□□□ -0.55
HIPK3-202ENST00000379016 TRIP12Q14669 1992 aaPredicted RBP11.59□□□□□ -0.55
HIPK3-202ENST00000379016 COL1A1P02452 1464 aaPredicted RBP11.59□□□□□ -0.55
HIPK3-202ENST00000379016 GP1BAP07359 652 aa11.59□□□□□ -0.55
HIPK3-202ENST00000379016 SFTPCP11686 197 aa11.59□□□□□ -0.55
HIPK3-202ENST00000379016 GABRG2P18507 467 aa11.59□□□□□ -0.55
HIPK3-202ENST00000379016 RND2P52198 227 aa11.59□□□□□ -0.55
HIPK3-202ENST00000379016 PRB3Q04118 309 aaPredicted RBP11.59□□□□□ -0.55
HIPK3-202ENST00000379016 CCL13Q99616 98 aa11.59□□□□□ -0.55
HIPK3-202ENST00000379016 FAM3BP58499 235 aaPredicted RBP11.59□□□□□ -0.55
HIPK3-202ENST00000379016 RAE1P78406 368 aaKnown RBP11.59□□□□□ -0.55
HIPK3-202ENST00000379016 PSG9Q00887 426 aa11.59□□□□□ -0.55
HIPK3-202ENST00000379016 C9orf50Q5SZB4 431 aa11.59□□□□□ -0.55
HIPK3-202ENST00000379016 KCNE5Q9UJ90 142 aa11.59□□□□□ -0.55
HIPK3-202ENST00000379016 TCRBV16S1A1N1A0A5B0 115 aa11.59□□□□□ -0.55
HIPK3-202ENST00000379016 ZAR1LA6NP61 321 aa11.59□□□□□ -0.55
HIPK3-202ENST00000379016 PEX7O00628 323 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms