RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 C19orf24Q9BVV8 132 aa11.31□□□□□ -0.6
UPK1A-202ENST00000379013 TMPRSS13Q9BYE2 586 aa11.31□□□□□ -0.6
UPK1A-202ENST00000379013 MMP28Q9H239 520 aa11.31□□□□□ -0.6
UPK1A-202ENST00000379013 COPZ2Q9P299 210 aa11.31□□□□□ -0.6
UPK1A-202ENST00000379013 MINOS1-NBL1R4GNA1 71 aa11.31□□□□□ -0.6
UPK1A-202ENST00000379013 IGHV3-43A0A0B4J1X8 118 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 TRAV40A0A0B4J280 105 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 IGKV1-6A0A0C4DH72 117 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 M0QYG6 137 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 RAB29O14966 203 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 LANCL1O43813 399 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 VENTXO95231 258 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 ARG1P05089 322 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 IGHV3-43DP0DP04 118 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 EPHA1P21709 976 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 COX7A1P24310 79 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 HTR1DP28221 377 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 GNG10P50151 68 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 ASAH1Q13510 395 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 SURF2Q15527 256 aaPredicted RBP11.3□□□□□ -0.6
UPK1A-202ENST00000379013 SCGB2B2Q4G0G5 96 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 ZNF626Q68DY1 528 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 C11orf88Q6PI97 169 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 CMTM1Q8IZ96 169 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 PNKDQ8N490 385 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 TERB2Q8NHR7 220 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 UBALD1Q8TB05 177 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 MOB3AQ96BX8 217 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 TBX15Q96SF7 602 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 SLC25A21Q9BQT8 299 aaPredicted RBP11.3□□□□□ -0.6
UPK1A-202ENST00000379013 TINAGL1Q9GZM7 467 aaPredicted RBP11.3□□□□□ -0.6
UPK1A-202ENST00000379013 OR1A1Q9P1Q5 309 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 PSG11Q9UQ72 335 aa11.3□□□□□ -0.6
UPK1A-202ENST00000379013 IGHV1-69DA0A0B4J2H0 117 aa11.29□□□□□ -0.6
UPK1A-202ENST00000379013 LEUTXA8MZ59 168 aa11.29□□□□□ -0.6
UPK1A-202ENST00000379013 OOSP1A8MZH6 123 aa11.29□□□□□ -0.6
UPK1A-202ENST00000379013 LYRM1O43325 122 aa11.29□□□□□ -0.6
UPK1A-202ENST00000379013 TUSC2O75896 110 aa11.29□□□□□ -0.6
UPK1A-202ENST00000379013 MMP23AO75900 390 aa11.29□□□□□ -0.6
UPK1A-202ENST00000379013 IGHV1-69P01742 117 aa11.29□□□□□ -0.6
UPK1A-202ENST00000379013 NFYAP23511 347 aaPredicted RBP11.29□□□□□ -0.6
UPK1A-202ENST00000379013 SRP14P37108 136 aaKnown RBP11.29□□□□□ -0.6
UPK1A-202ENST00000379013 GPR12P47775 334 aa11.29□□□□□ -0.6
UPK1A-202ENST00000379013 GNMTQ14749 295 aa11.29□□□□□ -0.6
UPK1A-202ENST00000379013 RBMS2Q15434 407 aaKnown RBP11.29□□□□□ -0.6
UPK1A-202ENST00000379013 HLA-DRB5Q30154 266 aa11.29□□□□□ -0.6
UPK1A-202ENST00000379013 SLC38A6Q8IZM9 456 aa11.29□□□□□ -0.6
UPK1A-202ENST00000379013 ZBTB34Q8NCN2 500 aa11.29□□□□□ -0.6
UPK1A-202ENST00000379013 ZFAND1Q8TCF1 268 aa11.29□□□□□ -0.6
UPK1A-202ENST00000379013 ZNF486Q96H40 463 aaPredicted RBP11.29□□□□□ -0.6
UPK1A-202ENST00000379013 CYYR1Q96J86 154 aa11.29□□□□□ -0.6
UPK1A-202ENST00000379013 HRASLSQ9HDD0 168 aa11.29□□□□□ -0.6
UPK1A-202ENST00000379013 CMYA5Q8N3K9 4069 aa11.29□□□□□ -0.6
UPK1A-202ENST00000379013 PKD1L1Q8TDX9 2849 aa11.29□□□□□ -0.6
UPK1A-202ENST00000379013 ODF3BA8MYP8 253 aa11.28□□□□□ -0.6
UPK1A-202ENST00000379013 NPFFO15130 113 aa11.28□□□□□ -0.6
UPK1A-202ENST00000379013 IGLV1-47P01700 117 aa11.28□□□□□ -0.6
UPK1A-202ENST00000379013 UCP3P55916 312 aa11.28□□□□□ -0.6
UPK1A-202ENST00000379013 FXYD4P59646 89 aa11.28□□□□□ -0.6
UPK1A-202ENST00000379013 IDO2Q6ZQW0 420 aa11.28□□□□□ -0.6
UPK1A-202ENST00000379013 LYG1Q8N1E2 194 aa11.28□□□□□ -0.6
UPK1A-202ENST00000379013 ZNF645Q8N7E2 425 aa11.28□□□□□ -0.6
UPK1A-202ENST00000379013 ZNF439Q8NDP4 499 aa11.28□□□□□ -0.6
UPK1A-202ENST00000379013 OR51S1Q8NGJ8 323 aa11.28□□□□□ -0.6
UPK1A-202ENST00000379013 OR56B4Q8NH76 319 aa11.28□□□□□ -0.6
UPK1A-202ENST00000379013 ENKURQ8TC29 256 aa11.28□□□□□ -0.6
UPK1A-202ENST00000379013 RPEQ96AT9 228 aa11.28□□□□□ -0.6
UPK1A-202ENST00000379013 AKR1E2Q96JD6 320 aa11.28□□□□□ -0.6
UPK1A-202ENST00000379013 C11orf54Q9H0W9 315 aaPredicted RBP11.28□□□□□ -0.6
UPK1A-202ENST00000379013 OR2D2Q9H210 308 aa11.28□□□□□ -0.6
UPK1A-202ENST00000379013 DPAGT1Q9H3H5 408 aa11.28□□□□□ -0.6
UPK1A-202ENST00000379013 NUP50Q9UKX7 468 aa11.28□□□□□ -0.6
UPK1A-202ENST00000379013 GAB2Q9UQC2 676 aa11.28□□□□□ -0.6
UPK1A-202ENST00000379013 C14orf166Q9Y224 244 aaKnown RBP11.28□□□□□ -0.6
UPK1A-202ENST00000379013 PIGBOS1A0A0B4J2F0 54 aa11.27□□□□□ -0.61
UPK1A-202ENST00000379013 CENPVL3A0A0U1RRI6 287 aa11.27□□□□□ -0.61
UPK1A-202ENST00000379013 RNASEK-C17orf49H0YIS7 233 aa11.27□□□□□ -0.61
UPK1A-202ENST00000379013 OR8U9P0C7N5 309 aa11.27□□□□□ -0.61
UPK1A-202ENST00000379013 PGAM2P15259 253 aa11.27□□□□□ -0.61
UPK1A-202ENST00000379013 AADACP22760 399 aa11.27□□□□□ -0.61
UPK1A-202ENST00000379013 ZNF137PP52743 207 aa11.27□□□□□ -0.61
UPK1A-202ENST00000379013 TAGLNQ01995 201 aaKnown RBP11.27□□□□□ -0.61
UPK1A-202ENST00000379013 ABCA11PQ4W5N1 156 aa11.27□□□□□ -0.61
UPK1A-202ENST00000379013 ZNF660Q6AZW8 331 aaPredicted RBP11.27□□□□□ -0.61
UPK1A-202ENST00000379013 CCDC71LQ8N9Z2 235 aa11.27□□□□□ -0.61
UPK1A-202ENST00000379013 OR8U1Q8NH10 309 aa11.27□□□□□ -0.61
UPK1A-202ENST00000379013 SECTM1Q8WVN6 248 aa11.27□□□□□ -0.61
UPK1A-202ENST00000379013 TOMM40LQ969M1 308 aa11.27□□□□□ -0.61
UPK1A-202ENST00000379013 ADTRPQ96IZ2 230 aa11.27□□□□□ -0.61
UPK1A-202ENST00000379013 SLC6A7Q99884 636 aa11.27□□□□□ -0.61
UPK1A-202ENST00000379013 SLC5A7Q9GZV3 580 aa11.27□□□□□ -0.61
UPK1A-202ENST00000379013 MS4A7Q9GZW8 240 aaPredicted RBP11.27□□□□□ -0.61
UPK1A-202ENST00000379013 DPM3Q9P2X0 92 aa11.27□□□□□ -0.61
UPK1A-202ENST00000379013 FAM96BQ9Y3D0 163 aa11.27□□□□□ -0.61
UPK1A-202ENST00000379013 LINC00854A0A1B0GVQ3 168 aa11.26□□□□□ -0.61
UPK1A-202ENST00000379013 FAM240BA0A1B0GVZ2 78 aa11.26□□□□□ -0.61
UPK1A-202ENST00000379013 BUB1B-PAK6H3BSN5 160 aa11.26□□□□□ -0.61
UPK1A-202ENST00000379013 ST8SIA5O15466 376 aa11.26□□□□□ -0.61
UPK1A-202ENST00000379013 GAPDHP04406 335 aaKnown RBP11.26□□□□□ -0.61
UPK1A-202ENST00000379013 CATR1Q13166 79 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms