RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 SYT13Q7L8C5 426 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 CALHM1Q8IU99 346 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 Q8IYB0 196 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 OR10P1Q8NGE3 313 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 SVIPQ8NHG7 77 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 ORAOV1Q8WV07 137 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 RELTQ969Z4 430 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 RNF2Q99496 336 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 FOXB1Q99853 325 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 ELOVL1Q9BW60 279 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 LINC00470Q9BZP3 86 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 OR2J1Q9GZK6 312 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 WDR54Q9H977 334 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 AURKAIP1Q9NWT8 199 aaPredicted RBP6.97□□□□□ -1.29
PTPRR-203ENST00000378778 KCNIP1Q9NZI2 227 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 CD207Q9UJ71 328 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 WIPI2Q9Y4P8 454 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 MPC1Q9Y5U8 109 aa6.97□□□□□ -1.29
PTPRR-203ENST00000378778 ARID1BQ8NFD5 2236 aaPredicted RBP6.96□□□□□ -1.3
PTPRR-203ENST00000378778 UBE2L5PA0A1B0GUS4 154 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 C20orf202A1L168 122 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 LILRA1O75019 489 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 IGKV1-39P01597 117 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 IGKV1D-39P04432 117 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 CD82P27701 267 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 CFHR1Q03591 330 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 DMRTC1Q5HYR2 192 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 FFAR4Q5NUL3 377 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 FAM78BQ5VT40 261 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 ACSM6Q6P461 480 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 WDR73Q6P4I2 378 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 NEK7Q8TDX7 302 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 THAP3Q8WTV1 239 aaPredicted RBP6.96□□□□□ -1.3
PTPRR-203ENST00000378778 SFRP2Q96HF1 295 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 GAL3ST2Q9H3Q3 398 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.96□□□□□ -1.3
PTPRR-203ENST00000378778 SLC45A2Q9UMX9 530 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 PCDH15Q96QU1 1955 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 CEP290O15078 2479 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 IGHV1OR15-9A0A0B4J2B8 117 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 FAM90A9PA6NNJ1 464 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 FAM166BA8MTA8 275 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 H3BP45 60 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 ATXN7O15265 892 aaPredicted RBP6.96□□□□□ -1.3
PTPRR-203ENST00000378778 MMP7P09237 267 aaPredicted RBP6.96□□□□□ -1.3
PTPRR-203ENST00000378778 P0C879 139 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 IAPPP10997 89 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 CDC34P49427 236 aaPredicted RBP6.96□□□□□ -1.3
PTPRR-203ENST00000378778 RPP30P78346 268 aaKnown RBP6.96□□□□□ -1.3
PTPRR-203ENST00000378778 DEFB133Q30KQ1 61 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 ARSJQ5FYB0 599 aaPredicted RBP6.96□□□□□ -1.3
PTPRR-203ENST00000378778 SPANXN5Q5MJ07 72 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 Q6ZRM9 215 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 AAED1Q7RTV5 226 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 OR5AU1Q8NGC0 362 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 OR51H1Q8NH63 302 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 IGFLR1Q9H665 355 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 SH2D2AQ9NP31 389 aa6.96□□□□□ -1.3
PTPRR-203ENST00000378778 ERRFI1Q9UJM3 462 aaPredicted RBP6.96□□□□□ -1.3
PTPRR-203ENST00000378778 A8MXE2 369 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 C9JCJ5 164 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 ITGB1BP1O14713 200 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 RAB29O14966 203 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 ZIC3O60481 467 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 PAGE4O60829 102 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 SS18L1O75177 396 aaPredicted RBP6.95□□□□□ -1.3
PTPRR-203ENST00000378778 IGKV1D-33P01593 117 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 IGKV1-33P01594 117 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 KITLGP21583 273 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 OR10J3Q5JRS4 329 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 ALKBH2Q6NS38 261 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 KLHDC1Q8N7A1 406 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 APOBEC3DQ96AK3 386 aaPredicted RBP6.95□□□□□ -1.3
PTPRR-203ENST00000378778 SDSLQ96GA7 329 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 OPN3Q9H1Y3 402 aaPredicted RBP6.95□□□□□ -1.3
PTPRR-203ENST00000378778 ASCL3Q9NQ33 180 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 ZNF586Q9NXT0 402 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 IL36BQ9NZH7 164 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 IL17BQ9UHF5 180 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 ZNF716A6NP11 495 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 VSTM5A8MXK1 200 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 WISP2O76076 250 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 TIAF1O95411 115 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 EDN3P14138 238 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 CRISP2P16562 243 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 SRD5A2P31213 254 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 RPS20P60866 119 aaKnown RBP6.95□□□□□ -1.3
PTPRR-203ENST00000378778 CATR1Q13166 79 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 ZNF585BQ52M93 769 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 SAPCD1Q5SSQ6 148 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 RAET1LQ5VY80 246 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 FBXW9Q5XUX1 488 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 OR10G8Q8NGN5 311 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 OR5B3Q8NH48 314 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 NPCDR1Q9BY65 106 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 GNB1LQ9BYB4 327 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 ZDHHC11Q9H8X9 412 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 UQCR10Q9UDW1 63 aa6.95□□□□□ -1.3
PTPRR-203ENST00000378778 A0A0J9YW62 118 aa6.94□□□□□ -1.3
PTPRR-203ENST00000378778 PMS2P5A8MQ11 134 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms