RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 LINC00587B1AMM8 73 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 SS18L1O75177 396 aaPredicted RBP12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 COX5AP20674 150 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 CRYGSP22914 178 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 OR4S2Q8NH73 311 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 OR1L1Q8NH94 360 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 ABHD14BQ96IU4 210 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 UBTD1Q9HAC8 227 aa12.12□□□□□ -0.47
SHROOM1-203ENST00000378679 CCL1P22362 96 aa12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 P2RY4P51582 365 aa12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 R3HDM4Q96D70 268 aa12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 SPOCK3Q9BQ16 436 aa12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 Q9N2K0 584 aa12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 MTCH1Q9NZJ7 389 aa12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 RPH3ALQ9UNE2 315 aa12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 ATXN7O15265 892 aaPredicted RBP12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 RNFT1Q5M7Z0 435 aa12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 UHRF2Q96PU4 802 aa12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 PROK2Q9HC23 129 aa12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 SLC25A10Q9UBX3 287 aaPredicted RBP12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 CLN8Q9UBY8 286 aa12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 CEP295Q9C0D2 2601 aa12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 IGHV2OR16-5A0A0B4J2B6 119 aa12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 E9PQ18 207 aa12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 TDGF1P13385 188 aa12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 FGF7P21781 194 aa12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 SLC38A11Q08AI6 406 aa12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 RHOVQ96L33 236 aa12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 PRRC2CQ9Y520 2896 aaKnown RBP12.11□□□□□ -0.47
SHROOM1-203ENST00000378679 C7orf77A4D0Y5 90 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 A8MXE2 369 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 EIF3GO75821 320 aaKnown RBP eCLIP12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 MUC1P15941 1255 aaPredicted RBP12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 HMGN3Q15651 99 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 PAQR4Q8N4S7 273 aaPredicted RBP12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 LINC01560Q8TB33 94 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 CORO2AQ92828 525 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 MOB3AQ96BX8 217 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 ADTRPQ96IZ2 230 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 TM2D1Q9BX74 207 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 ODAMA1E959 279 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 CDRT15L2A8MXV6 281 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 ETV2O00321 342 aaPredicted RBP12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 ACY3Q96HD9 319 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 ACTR3CQ9C0K3 210 aaPredicted RBP12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 HEXA-AS1Q9H8Q6 139 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 MMP26Q9NRE1 261 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 IL19Q9UHD0 177 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 ZDHHC8Q9ULC8 765 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 OR5G3P0C626 314 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 GLIPR1P48060 266 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 ZNF787Q6DD87 383 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 S100A7AQ86SG5 101 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 IL36RNQ9UBH0 155 aa12.1□□□□□ -0.47
SHROOM1-203ENST00000378679 SOX15O60248 233 aa12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 CYB5R3P00387 301 aaPredicted RBP12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 G6PCP35575 357 aa12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 PRRX1P54821 245 aa12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 ANKRD55Q3KP44 614 aa12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 RPUSD4Q96CM3 377 aaKnown RBP12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 SNX22Q96L94 193 aa12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 SLC2A8Q9NY64 477 aa12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 USP34Q70CQ2 3546 aa12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 CD40P25942 277 aa12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 RTP5Q14D33 572 aa12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 MRGPRGQ86SM5 289 aa12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 ZBTB34Q8NCN2 500 aa12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 DIRC2Q96SL1 478 aa12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 HSD17B10Q99714 261 aaKnown RBP12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 NUDT19A8MXV4 375 aa12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 FGF2P09038 288 aa12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 ACOT6Q3I5F7 207 aaPredicted RBP12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 PIPOXQ9P0Z9 390 aa12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 RNF115Q9Y4L5 304 aa12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 TLN1Q9Y490 2541 aaKnown RBP12.09□□□□□ -0.47
SHROOM1-203ENST00000378679 HIST3H3Q16695 136 aa12.08□□□□□ -0.47
SHROOM1-203ENST00000378679 CYB5R2Q6BCY4 276 aa12.08□□□□□ -0.47
SHROOM1-203ENST00000378679 ZDHHC11Q9H8X9 412 aa12.08□□□□□ -0.47
SHROOM1-203ENST00000378679 NCBP2LA6PVI3 153 aaKnown RBP12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 SLC25A6P12236 298 aa12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 KIR2DL2P43627 348 aaPredicted RBP12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 UQCC3Q6UW78 93 aa12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 ZNRF1Q8ND25 227 aa12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 OR8B3Q8NGG8 313 aa12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 PHYHIPLQ96FC7 376 aa12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 TMEM56Q96MV1 263 aa12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 OR8B2Q96RD0 313 aa12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 SAMD10Q9BYL1 202 aa12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 TNFSF18Q9UNG2 199 aa12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 OR7C2O60412 319 aa12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 IL18BPO95998 194 aa12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 MBP02144 154 aa12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 MMP7P09237 267 aaPredicted RBP12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 CT45A6P0DMU7 189 aa12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 CT45A5P0DMU8 189 aa12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 CT45A7P0DMV0 189 aa12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 CT45A1Q5HYN5 189 aa12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 IL34Q6ZMJ4 242 aa12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 ASCL5Q7RTU5 278 aa12.08□□□□□ -0.48
SHROOM1-203ENST00000378679 TGIF2LYQ8IUE0 185 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms