RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 EXTL2Q9UBQ6 330 aa16.09■□□□□ 0.17
RER1-204ENST00000378518 FBN1P35555 2871 aaKnown RBP16.08■□□□□ 0.16
RER1-204ENST00000378518 RAG2P55895 527 aa16.08■□□□□ 0.16
RER1-204ENST00000378518 HES1Q14469 280 aa16.08■□□□□ 0.16
RER1-204ENST00000378518 HOGA1Q86XE5 327 aa16.08■□□□□ 0.16
RER1-204ENST00000378518 TMEM219Q86XT9 240 aa16.08■□□□□ 0.16
RER1-204ENST00000378518 THNSL2Q86YJ6 484 aa16.08■□□□□ 0.16
RER1-204ENST00000378518 OR4F5Q8NH21 305 aa16.08■□□□□ 0.16
RER1-204ENST00000378518 CFHR4Q92496 578 aa16.08■□□□□ 0.16
RER1-204ENST00000378518 C6orf62Q9GZU0 229 aaPredicted RBP16.08■□□□□ 0.16
RER1-204ENST00000378518 NDUFA13Q9P0J0 144 aa16.08■□□□□ 0.16
RER1-204ENST00000378518 ZNF221Q9UK13 617 aa16.08■□□□□ 0.16
RER1-204ENST00000378518 SAA2-SAA4A0A096LPE2 208 aa16.07■□□□□ 0.16
RER1-204ENST00000378518 NDUFA7O95182 113 aa16.07■□□□□ 0.16
RER1-204ENST00000378518 SNRNP70P08621 437 aaKnown RBP16.07■□□□□ 0.16
RER1-204ENST00000378518 SAA2P0DJI9 122 aaPredicted RBP16.07■□□□□ 0.16
RER1-204ENST00000378518 CD24P25063 80 aa16.07■□□□□ 0.16
RER1-204ENST00000378518 ODF3L1Q8IXM7 274 aa16.07■□□□□ 0.16
RER1-204ENST00000378518 GVQW1Q8N7I0 195 aa16.07■□□□□ 0.16
RER1-204ENST00000378518 C15orf40Q8WUR7 153 aa16.07■□□□□ 0.16
RER1-204ENST00000378518 NPFFR1Q9GZQ6 430 aa16.07■□□□□ 0.16
RER1-204ENST00000378518 PARP12Q9H0J9 701 aaKnown RBP16.07■□□□□ 0.16
RER1-204ENST00000378518 RBM7Q9Y580 266 aaKnown RBP16.07■□□□□ 0.16
RER1-204ENST00000378518 MEIS3P1A6NDR6 274 aa16.06■□□□□ 0.16
RER1-204ENST00000378518 FAM90A9PA6NNJ1 464 aa16.06■□□□□ 0.16
RER1-204ENST00000378518 HLA-DQB1P01920 261 aa16.06■□□□□ 0.16
RER1-204ENST00000378518 GPR12P47775 334 aa16.06■□□□□ 0.16
RER1-204ENST00000378518 HABP2Q14520 560 aaPredicted RBP16.06■□□□□ 0.16
RER1-204ENST00000378518 CCBE1Q6UXH8 406 aaPredicted RBP16.06■□□□□ 0.16
RER1-204ENST00000378518 C12orf54Q6X4T0 127 aa16.06■□□□□ 0.16
RER1-204ENST00000378518 ZNF833PQ6ZTB9 187 aa16.06■□□□□ 0.16
RER1-204ENST00000378518 SNX29P2Q8IUI4 249 aa16.06■□□□□ 0.16
RER1-204ENST00000378518 LAX1Q8IWV1 398 aa16.06■□□□□ 0.16
RER1-204ENST00000378518 OR4C13Q8NGP0 309 aa16.06■□□□□ 0.16
RER1-204ENST00000378518 MCFD2Q8NI22 146 aa16.06■□□□□ 0.16
RER1-204ENST00000378518 ABHD14BQ96IU4 210 aa16.06■□□□□ 0.16
RER1-204ENST00000378518 SLC25A33Q9BSK2 321 aa16.06■□□□□ 0.16
RER1-204ENST00000378518 SLIRPQ9GZT3 109 aaKnown RBP16.06■□□□□ 0.16
RER1-204ENST00000378518 RANBP3Q9H6Z4 567 aaPredicted RBP16.06■□□□□ 0.16
RER1-204ENST00000378518 SCPEP1Q9HB40 452 aa16.06■□□□□ 0.16
RER1-204ENST00000378518 A0A1B0GUS0 222 aa16.05■□□□□ 0.16
RER1-204ENST00000378518 CTDSP2O14595 271 aa16.05■□□□□ 0.16
RER1-204ENST00000378518 CHST1O43916 411 aa16.05■□□□□ 0.16
RER1-204ENST00000378518 TPPPO94811 219 aa16.05■□□□□ 0.16
RER1-204ENST00000378518 OR2F2O95006 317 aa16.05■□□□□ 0.16
RER1-204ENST00000378518 IGKV1D-33P01593 117 aa16.05■□□□□ 0.16
RER1-204ENST00000378518 IGKV1-33P01594 117 aa16.05■□□□□ 0.16
RER1-204ENST00000378518 TMEM11P17152 192 aa16.05■□□□□ 0.16
RER1-204ENST00000378518 CD1BP29016 333 aa16.05■□□□□ 0.16
RER1-204ENST00000378518 OR3A3P47888 321 aa16.05■□□□□ 0.16
RER1-204ENST00000378518 H1FOOQ8IZA3 346 aaPredicted RBP16.05■□□□□ 0.16
RER1-204ENST00000378518 RBM14Q96PK6 669 aaKnown RBP16.05■□□□□ 0.16
RER1-204ENST00000378518 AGMATQ9BSE5 352 aa16.05■□□□□ 0.16
RER1-204ENST00000378518 DCUN1D5Q9BTE7 237 aa16.05■□□□□ 0.16
RER1-204ENST00000378518 MIXL1Q9H2W2 232 aa16.05■□□□□ 0.16
RER1-204ENST00000378518 BEX1Q9HBH7 125 aa16.05■□□□□ 0.16
RER1-204ENST00000378518 NECAP2Q9NVZ3 263 aa16.05■□□□□ 0.16
RER1-204ENST00000378518 IGHV3-72A0A0B4J1Y9 119 aa16.04■□□□□ 0.16
RER1-204ENST00000378518 SULT1C2O00338 296 aa16.04■□□□□ 0.16
RER1-204ENST00000378518 COMPP49747 757 aaPredicted RBP16.04■□□□□ 0.16
RER1-204ENST00000378518 AWAT1Q58HT5 328 aa16.04■□□□□ 0.16
RER1-204ENST00000378518 Q6ZSV7 163 aa16.04■□□□□ 0.16
RER1-204ENST00000378518 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.04■□□□□ 0.16
RER1-204ENST00000378518 OR2T10Q8NGZ9 312 aa16.04■□□□□ 0.16
RER1-204ENST00000378518 OR2D2Q9H210 308 aa16.04■□□□□ 0.16
RER1-204ENST00000378518 RABL2AQ9UBK7 228 aaPredicted RBP16.04■□□□□ 0.16
RER1-204ENST00000378518 RNF150Q9ULK6 438 aa16.04■□□□□ 0.16
RER1-204ENST00000378518 RABL2BQ9UNT1 228 aa16.04■□□□□ 0.16
RER1-204ENST00000378518 TSPAN9O75954 239 aa16.03■□□□□ 0.16
RER1-204ENST00000378518 FCER2P06734 321 aa16.03■□□□□ 0.16
RER1-204ENST00000378518 OR8U9P0C7N5 309 aa16.03■□□□□ 0.16
RER1-204ENST00000378518 RELBQ01201 579 aa16.03■□□□□ 0.16
RER1-204ENST00000378518 LSAMPQ13449 338 aa16.03■□□□□ 0.16
RER1-204ENST00000378518 RPL39P5Q59GN2 51 aa16.03■□□□□ 0.16
RER1-204ENST00000378518 OR5AP2Q8NGF4 316 aa16.03■□□□□ 0.16
RER1-204ENST00000378518 OR8U1Q8NH10 309 aa16.03■□□□□ 0.16
RER1-204ENST00000378518 SPATA3Q8NHX4 192 aa16.03■□□□□ 0.16
RER1-204ENST00000378518 GPX8Q8TED1 209 aa16.03■□□□□ 0.16
RER1-204ENST00000378518 TAF15Q92804 592 aaKnown RBP eCLIP16.03■□□□□ 0.168e-7■■□□□ 11.8
RER1-204ENST00000378518 DIRAS2Q96HU8 199 aa16.03■□□□□ 0.16
RER1-204ENST00000378518 NABP2Q9BQ15 211 aa16.03■□□□□ 0.16
RER1-204ENST00000378518 MRPL20Q9BYC9 149 aaKnown RBP16.03■□□□□ 0.16
RER1-204ENST00000378518 MOB4Q9Y3A3 225 aa16.03■□□□□ 0.16
RER1-204ENST00000378518 M0QZK8 103 aa16.02■□□□□ 0.16
RER1-204ENST00000378518 NFYAP23511 347 aaPredicted RBP16.02■□□□□ 0.16
RER1-204ENST00000378518 TAS2R46P59540 309 aa16.02■□□□□ 0.16
RER1-204ENST00000378518 EBI3Q14213 229 aa16.02■□□□□ 0.16
RER1-204ENST00000378518 CDK10Q15131 360 aa16.02■□□□□ 0.16
RER1-204ENST00000378518 SNAPC3Q92966 411 aa16.02■□□□□ 0.16
RER1-204ENST00000378518 DGCR14Q96DF8 476 aaKnown RBP16.02■□□□□ 0.16
RER1-204ENST00000378518 PRSS22Q9GZN4 317 aa16.02■□□□□ 0.16
RER1-204ENST00000378518 NXF2Q9GZY0 626 aaKnown RBP16.02■□□□□ 0.16
RER1-204ENST00000378518 C16orf95Q9H693 158 aa16.02■□□□□ 0.16
RER1-204ENST00000378518 ANAPC10Q9UM13 185 aa16.02■□□□□ 0.16
RER1-204ENST00000378518 OR2W1Q9Y3N9 320 aa16.02■□□□□ 0.16
RER1-204ENST00000378518 MMP24Q9Y5R2 645 aa16.02■□□□□ 0.16
RER1-204ENST00000378518 CLPSL1A2RUU4 121 aa16.01■□□□□ 0.15
RER1-204ENST00000378518 MOSP00540 346 aa16.01■□□□□ 0.15
RER1-204ENST00000378518 MDKP21741 143 aaPredicted RBP16.01■□□□□ 0.15
RER1-204ENST00000378518 RCVRNP35243 200 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms