RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 TRPM7Q96QT4 1865 aa12.98□□□□□ -0.33
NPHP4-201ENST00000378156 NPIPB13A6NJU9 1138 aa12.98□□□□□ -0.33
NPHP4-201ENST00000378156 NPIPB4C9JG80 1138 aa12.98□□□□□ -0.33
NPHP4-201ENST00000378156 GAPDHP04406 335 aaKnown RBP12.98□□□□□ -0.33
NPHP4-201ENST00000378156 B2MP61769 119 aa12.98□□□□□ -0.33
NPHP4-201ENST00000378156 CSRP2Q16527 193 aa12.98□□□□□ -0.33
NPHP4-201ENST00000378156 OR8B3Q8NGG8 313 aa12.98□□□□□ -0.33
NPHP4-201ENST00000378156 BLNKQ8WV28 456 aa12.98□□□□□ -0.33
NPHP4-201ENST00000378156 OR8B2Q96RD0 313 aa12.98□□□□□ -0.33
NPHP4-201ENST00000378156 OR2T8A6NH00 312 aa12.98□□□□□ -0.33
NPHP4-201ENST00000378156 BTCP35070 178 aa12.98□□□□□ -0.33
NPHP4-201ENST00000378156 NHLRC3Q5JS37 347 aa12.98□□□□□ -0.33
NPHP4-201ENST00000378156 A0A1W2PRD5 423 aa12.98□□□□□ -0.33
NPHP4-201ENST00000378156 A0A1W2PRF3 423 aa12.98□□□□□ -0.33
NPHP4-201ENST00000378156 A0A1W2PRM7 423 aa12.98□□□□□ -0.33
NPHP4-201ENST00000378156 ZNF785A8K8V0 405 aa12.98□□□□□ -0.33
NPHP4-201ENST00000378156 ATG101Q9BSB4 218 aa12.98□□□□□ -0.33
NPHP4-201ENST00000378156 OR51M1Q9H341 326 aa12.98□□□□□ -0.33
NPHP4-201ENST00000378156 IGKV1D-43A0A0B4J1Z2 117 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 MFSD2BA6NFX1 497 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 CCL8P80075 99 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 LRRC75AQ8NAA5 344 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 DCAF16Q9NXF7 216 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 HEATR5BQ9P2D3 2071 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 M0QZ24 198 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 HOXB1P14653 301 aaPredicted RBP12.97□□□□□ -0.33
NPHP4-201ENST00000378156 HOXA6P31267 233 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 GUCA2BQ16661 112 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 FNDC7Q5VTL7 733 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 SRXN1Q9BYN0 137 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 J3QRE1 110 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 ZBTB34Q8NCN2 500 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 THYN1Q9P016 225 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 CTXND1A0A1B0GTU2 59 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 PRR32B1ATL7 298 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 PRDX2P32119 198 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 P2RY4P51582 365 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 FGF12P61328 243 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 UBE2L3P68036 154 aaKnown RBP12.97□□□□□ -0.33
NPHP4-201ENST00000378156 FAM209BQ5JX69 171 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 EIF4E3Q8N5X7 224 aaKnown RBP12.97□□□□□ -0.33
NPHP4-201ENST00000378156 OR1L6Q8NGR2 347 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 SRD5A3Q9H8P0 318 aa12.97□□□□□ -0.33
NPHP4-201ENST00000378156 GCGP01275 180 aa12.96□□□□□ -0.33
NPHP4-201ENST00000378156 Q56UQ5 140 aa12.96□□□□□ -0.33
NPHP4-201ENST00000378156 H1FOOQ8IZA3 346 aaPredicted RBP12.96□□□□□ -0.33
NPHP4-201ENST00000378156 RCC2Q9P258 522 aaKnown RBP12.96□□□□□ -0.33
NPHP4-201ENST00000378156 PRSS1P07477 247 aa12.96□□□□□ -0.33
NPHP4-201ENST00000378156 SNAI3Q3KNW1 292 aa12.96□□□□□ -0.33
NPHP4-201ENST00000378156 TGIF2LYQ8IUE0 185 aa12.96□□□□□ -0.33
NPHP4-201ENST00000378156 TGIF2LXQ8IUE1 241 aa12.96□□□□□ -0.33
NPHP4-201ENST00000378156 MRGPRFQ96AM1 343 aa12.96□□□□□ -0.33
NPHP4-201ENST00000378156 HSPB8Q9UJY1 196 aa12.96□□□□□ -0.33
NPHP4-201ENST00000378156 WIPI2Q9Y4P8 454 aa12.96□□□□□ -0.33
NPHP4-201ENST00000378156 CHCHD2Q9Y6H1 151 aaPredicted RBP12.96□□□□□ -0.33
NPHP4-201ENST00000378156 IGHV3OR15-7A0A075B7D8 119 aa12.96□□□□□ -0.34
NPHP4-201ENST00000378156 RAMP1O60894 148 aa12.96□□□□□ -0.34
NPHP4-201ENST00000378156 RTP5Q14D33 572 aa12.96□□□□□ -0.34
NPHP4-201ENST00000378156 C21orf62-AS1Q17RA5 79 aa12.96□□□□□ -0.34
NPHP4-201ENST00000378156 C2orf68Q2NKX9 166 aa12.96□□□□□ -0.34
NPHP4-201ENST00000378156 ZNF880Q6PDB4 577 aa12.96□□□□□ -0.34
NPHP4-201ENST00000378156 ASCL5Q7RTU5 278 aa12.96□□□□□ -0.34
NPHP4-201ENST00000378156 HSD17B10Q99714 261 aaKnown RBP12.96□□□□□ -0.34
NPHP4-201ENST00000378156 C5orf66Q9H5L9 145 aa12.96□□□□□ -0.34
NPHP4-201ENST00000378156 NPTNQ9Y639 398 aa12.96□□□□□ -0.34
NPHP4-201ENST00000378156 SPTBN1Q01082 2364 aaKnown RBP12.96□□□□□ -0.34
NPHP4-201ENST00000378156 A0A1B0GU03 582 aa12.96□□□□□ -0.34
NPHP4-201ENST00000378156 ADAMTS17Q8TE56 1095 aa12.96□□□□□ -0.34
NPHP4-201ENST00000378156 CLN8Q9UBY8 286 aa12.96□□□□□ -0.34
NPHP4-201ENST00000378156 FAM157AC9JC47 383 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 SUCLG1P53597 346 aaKnown RBP12.95□□□□□ -0.34
NPHP4-201ENST00000378156 BPIFA4PQ86YQ2 179 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 LINC00518Q8N0U6 118 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 PUSL1Q8N0Z8 303 aaKnown RBP12.95□□□□□ -0.34
NPHP4-201ENST00000378156 OR1K1Q8NGR3 316 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 MRPL30Q8TCC3 161 aaKnown RBP12.95□□□□□ -0.34
NPHP4-201ENST00000378156 AKAP6Q13023 2319 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 NBASA2RRP1 2371 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 PPIAL4EA0A075B759 164 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 PPIAL4DF5H284 164 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 CD74P04233 296 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 PPIAL4FP0DN26 164 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 RPL31P62899 125 aaKnown RBP12.95□□□□□ -0.34
NPHP4-201ENST00000378156 RSPO4Q2I0M5 234 aaPredicted RBP12.95□□□□□ -0.34
NPHP4-201ENST00000378156 ZNF738Q8NE65 137 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 DTD1Q8TEA8 209 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 TBX15Q96SF7 602 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 HEXA-AS1Q9H8Q6 139 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 PAM16Q9Y3D7 125 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 PPIAL4AQ9Y536 164 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 CACNA1HO95180 2353 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 DICER1Q9UPY3 1922 aaKnown RBP12.95□□□□□ -0.34
NPHP4-201ENST00000378156 TMEM14DPA8MWL7 114 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 K7ESF4 209 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 IGHMP01871 453 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 RIGQ13278 110 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 PDPNQ86YL7 162 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 ELOVL1Q9BW60 279 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 MED12Q93074 2177 aa12.95□□□□□ -0.34
NPHP4-201ENST00000378156 ZNF646O15015 1829 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms