RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 FAM87AP0C7U9 286 aa16.88■□□□□ 0.29
PCDH8-202ENST00000377942 C10orf113Q5VZT2 155 aa16.88■□□□□ 0.29
PCDH8-202ENST00000377942 CECR9P0C854 216 aa16.87■□□□□ 0.29
PCDH8-202ENST00000377942 SSMEM1Q8WWF3 244 aa16.87■□□□□ 0.29
PCDH8-202ENST00000377942 ZNF552Q9H707 407 aaPredicted RBP16.87■□□□□ 0.29
PCDH8-202ENST00000377942 ZSWIM8A7E2V4 1837 aa16.87■□□□□ 0.29
PCDH8-202ENST00000377942 TMEM88Q6PEY1 159 aa16.87■□□□□ 0.29
PCDH8-202ENST00000377942 TNFSF18Q9UNG2 199 aa16.87■□□□□ 0.29
PCDH8-202ENST00000377942 PPIAL4CA0A0B4J2A2 164 aa16.87■□□□□ 0.29
PCDH8-202ENST00000377942 PPIAL4GP0DN37 164 aa16.87■□□□□ 0.29
PCDH8-202ENST00000377942 VSIG10L2P0DP72 767 aa16.87■□□□□ 0.29
PCDH8-202ENST00000377942 FGF8P55075 233 aaPredicted RBP16.87■□□□□ 0.29
PCDH8-202ENST00000377942 PSG5Q15238 335 aa16.87■□□□□ 0.29
PCDH8-202ENST00000377942 OR4P4Q8NGL7 312 aa16.87■□□□□ 0.29
PCDH8-202ENST00000377942 OR9G1Q8NH87 305 aa16.87■□□□□ 0.29
PCDH8-202ENST00000377942 SCN2AQ99250 2005 aa16.87■□□□□ 0.29
PCDH8-202ENST00000377942 PITX3O75364 302 aa16.87■□□□□ 0.29
PCDH8-202ENST00000377942 DPPA3Q6W0C5 159 aa16.87■□□□□ 0.29
PCDH8-202ENST00000377942 SLC35E3Q7Z769 313 aa16.87■□□□□ 0.29
PCDH8-202ENST00000377942 NPDC1Q9NQX5 325 aaPredicted RBP16.87■□□□□ 0.29
PCDH8-202ENST00000377942 CTXND1A0A1B0GTU2 59 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 CD40P25942 277 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 COMPP49747 757 aaPredicted RBP16.86■□□□□ 0.29
PCDH8-202ENST00000377942 LHX2P50458 406 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 CLDN18P56856 261 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 DHRS7BQ6IAN0 325 aaPredicted RBP16.86■□□□□ 0.29
PCDH8-202ENST00000377942 NPVFQ9HCQ7 196 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 SMPD2O60906 423 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 HTR1DP28221 377 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 ATP5J2P56134 94 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 DEFA6Q01524 100 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 ECSCRQ19T08 205 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 VAX2Q9UIW0 290 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 SLC35E4Q6ICL7 350 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 CLEC9AQ6UXN8 241 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 SPNS3Q6ZMD2 512 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 C1QTNF5Q9BXJ0 243 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 NAT8Q9UHE5 227 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 FAM90A26D6RGX4 464 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 IFITM3Q01628 133 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 FAM27E3Q08E93 113 aa16.86■□□□□ 0.29
PCDH8-202ENST00000377942 MPDU1O75352 247 aa16.85■□□□□ 0.29
PCDH8-202ENST00000377942 PGLYRP1O75594 196 aaPredicted RBP16.85■□□□□ 0.29
PCDH8-202ENST00000377942 UCP3P55916 312 aa16.85■□□□□ 0.29
PCDH8-202ENST00000377942 SERF2P84101 59 aa16.85■□□□□ 0.29
PCDH8-202ENST00000377942 SSX7Q7RTT5 188 aa16.85■□□□□ 0.29
PCDH8-202ENST00000377942 SEC14L6B5MCN3 397 aa16.85■□□□□ 0.29
PCDH8-202ENST00000377942 IL22RA2Q969J5 263 aa16.85■□□□□ 0.29
PCDH8-202ENST00000377942 MEGF10Q96KG7 1140 aa16.85■□□□□ 0.29
PCDH8-202ENST00000377942 PITPNC1Q9UKF7 332 aa16.85■□□□□ 0.29
PCDH8-202ENST00000377942 GALR1P47211 349 aa16.85■□□□□ 0.29
PCDH8-202ENST00000377942 RPL8P62917 257 aaKnown RBP16.85■□□□□ 0.29
PCDH8-202ENST00000377942 LIPFP07098 398 aa16.85■□□□□ 0.29
PCDH8-202ENST00000377942 LGALSLQ3ZCW2 172 aaPredicted RBP16.85■□□□□ 0.29
PCDH8-202ENST00000377942 TMEM186Q96B77 213 aa16.85■□□□□ 0.29
PCDH8-202ENST00000377942 C11orf94C9JXX5 98 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 HSBP1O75506 76 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 CEBPDP49716 269 aaPredicted RBP16.84■□□□□ 0.29
PCDH8-202ENST00000377942 ANKRD55Q3KP44 614 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 KHDC3LQ587J8 217 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 LINC01560Q8TB33 94 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 TMEM208Q9BTX3 173 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 HILPDAQ9Y5L2 63 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 IGKV1D-43A0A0B4J1Z2 117 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 FOXH1O75593 365 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 CXorf1O96002 111 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 C2CD4CQ8TF44 421 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 RALYQ9UKM9 306 aaKnown RBP16.84■□□□□ 0.29
PCDH8-202ENST00000377942 NPIPB7O75200 414 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 CD1BP29016 333 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 SELENOTP62341 195 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 FA2HQ7L5A8 372 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 CLRN3Q8NCR9 226 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 LURAP1Q96LR2 239 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 NPAS1Q99742 590 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 MRPL13Q9BYD1 178 aaKnown RBP16.84■□□□□ 0.29
PCDH8-202ENST00000377942 SEMA5BQ9P283 1151 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 YTHDF2Q9Y5A9 579 aaKnown RBP16.84■□□□□ 0.29
PCDH8-202ENST00000377942 TRAPPC1Q9Y5R8 145 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 RCC1P18754 421 aaPredicted RBP16.84■□□□□ 0.29
PCDH8-202ENST00000377942 PARP11Q9NR21 331 aa16.84■□□□□ 0.29
PCDH8-202ENST00000377942 LOC105371242A0A075B767 164 aa16.83■□□□□ 0.29
PCDH8-202ENST00000377942 NPBWR2P48146 333 aa16.83■□□□□ 0.29
PCDH8-202ENST00000377942 PAFAH1B2P68402 229 aa16.83■□□□□ 0.29
PCDH8-202ENST00000377942 BSXQ3C1V8 233 aa16.83■□□□□ 0.29
PCDH8-202ENST00000377942 COX19Q49B96 90 aa16.83■□□□□ 0.29
PCDH8-202ENST00000377942 C4orf17Q53FE4 359 aa16.83■□□□□ 0.29
PCDH8-202ENST00000377942 MFNGO00587 321 aa16.83■□□□□ 0.28
PCDH8-202ENST00000377942 FAM74A3Q4VXF1 159 aa16.83■□□□□ 0.28
PCDH8-202ENST00000377942 STPG2Q8N412 459 aa16.83■□□□□ 0.28
PCDH8-202ENST00000377942 ANGPTL6Q8NI99 470 aa16.83■□□□□ 0.28
PCDH8-202ENST00000377942 MED19A0JLT2 244 aaPredicted RBP16.83■□□□□ 0.28
PCDH8-202ENST00000377942 NEU4Q8WWR8 484 aaPredicted RBP16.83■□□□□ 0.28
PCDH8-202ENST00000377942 SS18L1O75177 396 aaPredicted RBP16.83■□□□□ 0.28
PCDH8-202ENST00000377942 CD74P04233 296 aa16.83■□□□□ 0.28
PCDH8-202ENST00000377942 REPIN1Q9BWE0 567 aaKnown RBP16.83■□□□□ 0.28
PCDH8-202ENST00000377942 ICE1Q9Y2F5 2266 aa16.82■□□□□ 0.28
PCDH8-202ENST00000377942 CDRT15L2A8MXV6 281 aa16.82■□□□□ 0.28
PCDH8-202ENST00000377942 ATP6V0CP27449 155 aa16.82■□□□□ 0.28
PCDH8-202ENST00000377942 SLC35B1P78383 322 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms