RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 DCAF10Q5QP82 559 aa4.24□□□□□ -1.73
PCDH9-201ENST00000377861 LCN15Q6UWW0 184 aa4.24□□□□□ -1.73
PCDH9-201ENST00000377861 OR1L3Q8NH93 324 aa4.24□□□□□ -1.73
PCDH9-201ENST00000377861 MEX3AA1L020 520 aaKnown RBP4.24□□□□□ -1.73
PCDH9-201ENST00000377861 RPL13AP40429 203 aaKnown RBP4.24□□□□□ -1.73
PCDH9-201ENST00000377861 OR4A47Q6IF82 309 aa4.24□□□□□ -1.73
PCDH9-201ENST00000377861 RPRMQ9NS64 109 aa4.24□□□□□ -1.73
PCDH9-201ENST00000377861 OR4X2Q8NGF9 303 aa4.24□□□□□ -1.73
PCDH9-201ENST00000377861 SLC25A34Q6PIV7 304 aa4.24□□□□□ -1.73
PCDH9-201ENST00000377861 TEX45Q8NA69 505 aa4.24□□□□□ -1.73
PCDH9-201ENST00000377861 NRAPQ86VF7 1730 aa4.24□□□□□ -1.73
PCDH9-201ENST00000377861 MYOGP15173 224 aa4.24□□□□□ -1.73
PCDH9-201ENST00000377861 OR1D5P58170 312 aa4.24□□□□□ -1.73
PCDH9-201ENST00000377861 ZNF497Q6ZNH5 498 aa4.24□□□□□ -1.73
PCDH9-201ENST00000377861 LPAR2Q9HBW0 351 aa4.24□□□□□ -1.73
PCDH9-201ENST00000377861 MYH1P12882 1939 aa4.24□□□□□ -1.73
PCDH9-201ENST00000377861 TRAV20A0A0B4J274 112 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 SHISA9B4DS77 424 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 FAM87AP0C7U9 286 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 AP5S1Q9NUS5 200 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 OR3A1P47881 315 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 PDLIM4P50479 330 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 PSG4Q00888 419 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 OR9G9P0C7N8 305 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 ACP1P24666 158 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 TMEM182Q6ZP80 229 aaPredicted RBP4.23□□□□□ -1.73
PCDH9-201ENST00000377861 MYOZ3Q8TDC0 251 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 TRMT61AQ96FX7 289 aaKnown RBP4.23□□□□□ -1.73
PCDH9-201ENST00000377861 ROBO1Q9Y6N7 1651 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 ZFP36L1Q07352 338 aaKnown RBP4.23□□□□□ -1.73
PCDH9-201ENST00000377861 NNATQ16517 81 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 ZNF385CQ66K41 422 aaPredicted RBP4.23□□□□□ -1.73
PCDH9-201ENST00000377861 FLVCR1-AS1Q8TAF5 88 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 PARD6AQ9NPB6 346 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 TMEM140Q9NV12 185 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 PROCRQ9UNN8 238 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 P01737 135 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 LEMD1Q68G75 181 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 KIAA1551Q9HCM1 1747 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 PHLPP1O60346 1717 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 FAM231DQ6ZW35 169 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 FSCN3Q9NQT6 498 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 TRGV8A0A0C4DH27 118 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 SERTAD4Q9NUC0 356 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 NME2P1O60361 137 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 IGHV4-34P06331 123 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 SP1P08047 785 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 FAM106CPP0CH98 169 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 GLRX5Q86SX6 157 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 MED29Q9NX70 200 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.23□□□□□ -1.73
PCDH9-201ENST00000377861 GPM6AP51674 278 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 HNRNPA3P51991 378 aaKnown RBP4.23□□□□□ -1.73
PCDH9-201ENST00000377861 C2CD4CQ8TF44 421 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 ASCL2Q99929 193 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 UPK2O00526 184 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 ZNF474Q6S9Z5 364 aaPredicted RBP4.23□□□□□ -1.73
PCDH9-201ENST00000377861 FAM60AQ9NP50 221 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 SPTA1P02549 2419 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 TNFSF13O75888 250 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 OR4C12Q96R67 309 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 MBNL3Q9NUK0 354 aaKnown RBP4.23□□□□□ -1.73
PCDH9-201ENST00000377861 PAPPA2Q9BXP8 1791 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 SYNGR3O43761 229 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 LSM11P83369 360 aaKnown RBP eCLIP4.23□□□□□ -1.73
PCDH9-201ENST00000377861 TSPOP30536 169 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 DYNLT3P51808 116 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 C6orf106Q9H6K1 298 aaPredicted RBP4.23□□□□□ -1.73
PCDH9-201ENST00000377861 SRSF10O75494 262 aaKnown RBP4.23□□□□□ -1.73
PCDH9-201ENST00000377861 NDUFB8O95169 186 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 C10orf113Q5VZT2 155 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 NPRL2Q8WTW4 380 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 C16orf97H3BN30 126 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 ZIC3O60481 467 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 A0A1W2PR77 199 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 NTF3P20783 257 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 HERVK_113P61574 105 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 CD300CQ08708 224 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 PLSCR4Q9NRQ2 329 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 H3BQ85 93 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 PYGO2Q9BRQ0 406 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 CNTRLQ7Z7A1 2325 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 K7N7A8 449 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 POU2AF1Q16633 256 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 TMEM97Q5BJF2 176 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 CRYGSP22914 178 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 BEX5Q5H9J7 111 aa4.23□□□□□ -1.73
PCDH9-201ENST00000377861 MYH7P12883 1935 aa4.22□□□□□ -1.73
PCDH9-201ENST00000377861 G6PCP35575 357 aa4.22□□□□□ -1.73
PCDH9-201ENST00000377861 RBPMS2Q6ZRY4 209 aaKnown RBP4.22□□□□□ -1.73
PCDH9-201ENST00000377861 THY1P04216 161 aa4.22□□□□□ -1.73
PCDH9-201ENST00000377861 FABP2P12104 132 aa4.22□□□□□ -1.73
PCDH9-201ENST00000377861 GPR6P46095 362 aaPredicted RBP4.22□□□□□ -1.73
PCDH9-201ENST00000377861 VASH2Q86V25 355 aa4.22□□□□□ -1.73
PCDH9-201ENST00000377861 RNF138Q8WVD3 245 aa4.22□□□□□ -1.73
PCDH9-201ENST00000377861 ARPC1AQ92747 370 aa4.22□□□□□ -1.73
PCDH9-201ENST00000377861 KBTBD11-OT1A0A1B0GTJ5 212 aa4.22□□□□□ -1.73
PCDH9-201ENST00000377861 SMIM30A4D0T7 59 aa4.22□□□□□ -1.73
PCDH9-201ENST00000377861 NCBP2LA6PVI3 153 aaKnown RBP4.22□□□□□ -1.73
PCDH9-201ENST00000377861 SFTPA2Q8IWL1 248 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms